Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.74■□□□□ 0.43
ERCC3P19447 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
ERCC3P19447 MIR1202-201ENST00000408529 83 ntBASIC17.74■□□□□ 0.43
ERCC3P19447 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC3P19447 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC3P19447 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.74■□□□□ 0.43
ERCC3P19447 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC3P19447 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC3P19447 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC3P19447 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ERCC3P19447 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.74■□□□□ 0.43
ERCC3P19447 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.74■□□□□ 0.43
ERCC3P19447 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.74■□□□□ 0.43
ERCC3P19447 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.74■□□□□ 0.43
ERCC3P19447 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.74■□□□□ 0.43
ERCC3P19447 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.74■□□□□ 0.43
ERCC3P19447 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC3P19447 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC3P19447 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
ERCC3P19447 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.74■□□□□ 0.43
ERCC3P19447 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC3P19447 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ERCC3P19447 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.74■□□□□ 0.43
ERCC3P19447 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC3P19447 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC3P19447 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.74■□□□□ 0.43
ERCC3P19447 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ERCC3P19447 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC3P19447 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ERCC3P19447 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.74■□□□□ 0.43
ERCC3P19447 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ERCC3P19447 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ERCC3P19447 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC3P19447 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC3P19447 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ERCC3P19447 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ERCC3P19447 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ERCC3P19447 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ERCC3P19447 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC3P19447 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC3P19447 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC3P19447 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.73■□□□□ 0.43
ERCC3P19447 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.73■□□□□ 0.43
ERCC3P19447 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC3P19447 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC3P19447 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC3P19447 RNU1-114P-201ENST00000365297 166 ntBASIC17.73■□□□□ 0.43
ERCC3P19447 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.73■□□□□ 0.43
ERCC3P19447 KLF2P2-201ENST00000416807 1039 ntBASIC17.73■□□□□ 0.43
ERCC3P19447 AC104306.2-201ENST00000451877 341 ntBASIC17.73■□□□□ 0.43
ERCC3P19447 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ERCC3P19447 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC3P19447 AL022328.3-201ENST00000607943 679 ntBASIC17.73■□□□□ 0.43
ERCC3P19447 AC006453.4-201ENST00000636949 1252 ntBASIC17.73■□□□□ 0.43
ERCC3P19447 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.73■□□□□ 0.43
ERCC3P19447 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC3P19447 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.73■□□□□ 0.43
ERCC3P19447 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC3P19447 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC3P19447 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.73■□□□□ 0.43
ERCC3P19447 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC3P19447 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC3P19447 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC3P19447 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC3P19447 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC3P19447 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC3P19447 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC3P19447 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC3P19447 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ERCC3P19447 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC3P19447 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC3P19447 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.72■□□□□ 0.43
ERCC3P19447 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
ERCC3P19447 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC3P19447 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC3P19447 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ERCC3P19447 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ERCC3P19447 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC3P19447 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC3P19447 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
ERCC3P19447 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC3P19447 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC3P19447 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ERCC3P19447 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC3P19447 ACTBP8-201ENST00000403258 1108 ntBASIC17.72■□□□□ 0.43
ERCC3P19447 AC007969.1-201ENST00000433675 447 ntBASIC17.72■□□□□ 0.43
ERCC3P19447 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC3P19447 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC3P19447 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.72■□□□□ 0.43
ERCC3P19447 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC3P19447 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
ERCC3P19447 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC3P19447 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC3P19447 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC3P19447 AC025181.2-201ENST00000606994 802 ntBASIC17.72■□□□□ 0.43
ERCC3P19447 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
ERCC3P19447 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.72■□□□□ 0.43
ERCC3P19447 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.72■□□□□ 0.43
ERCC3P19447 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ERCC3P19447 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms