Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.99■□□□□ 0.47
TOP1P11387 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TOP1P11387 BOLA2P3-201ENST00000404566 256 ntBASIC17.99■□□□□ 0.47
TOP1P11387 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.99■□□□□ 0.47
TOP1P11387 AC234783.1-201ENST00000441761 496 ntBASIC17.99■□□□□ 0.47
TOP1P11387 AC106760.1-201ENST00000508690 800 ntBASIC17.99■□□□□ 0.47
TOP1P11387 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.99■□□□□ 0.47
TOP1P11387 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 SAMD11P1-201ENST00000571429 661 ntBASIC17.99■□□□□ 0.47
TOP1P11387 AC017083.2-201ENST00000608069 979 ntBASIC17.99■□□□□ 0.47
TOP1P11387 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TOP1P11387 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.99■□□□□ 0.47
TOP1P11387 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TOP1P11387 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.99■□□□□ 0.47
TOP1P11387 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 AC136621.1-201ENST00000624017 2304 ntBASIC17.99■□□□□ 0.47
TOP1P11387 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TOP1P11387 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TOP1P11387 AC087481.3-201ENST00000602886 1894 ntBASIC17.99■□□□□ 0.47
TOP1P11387 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TOP1P11387 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.98■□□□□ 0.47
TOP1P11387 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.98■□□□□ 0.47
TOP1P11387 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.98■□□□□ 0.47
TOP1P11387 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.98■□□□□ 0.47
TOP1P11387 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
TOP1P11387 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.98■□□□□ 0.47
TOP1P11387 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 AL645937.2-201ENST00000396808 931 ntBASIC17.98■□□□□ 0.47
TOP1P11387 AC104457.1-201ENST00000401024 814 ntBASIC17.98■□□□□ 0.47
TOP1P11387 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TOP1P11387 MIR1909-201ENST00000411312 80 ntBASIC17.98■□□□□ 0.47
TOP1P11387 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TOP1P11387 KRT18P25-201ENST00000508931 1278 ntBASIC17.98■□□□□ 0.47
TOP1P11387 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.98■□□□□ 0.47
TOP1P11387 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TOP1P11387 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.98■□□□□ 0.47
TOP1P11387 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.98■□□□□ 0.47
TOP1P11387 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.98■□□□□ 0.47
TOP1P11387 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.98■□□□□ 0.47
TOP1P11387 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.98■□□□□ 0.47
TOP1P11387 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.98■□□□□ 0.47
TOP1P11387 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TOP1P11387 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TOP1P11387 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TOP1P11387 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.98■□□□□ 0.47
TOP1P11387 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.98■□□□□ 0.47
TOP1P11387 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.98■□□□□ 0.47
TOP1P11387 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP1P11387 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
TOP1P11387 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
TOP1P11387 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TOP1P11387 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.97■□□□□ 0.47
TOP1P11387 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TOP1P11387 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TOP1P11387 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.97■□□□□ 0.47
TOP1P11387 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TOP1P11387 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms