Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PDGFAP04085 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.42□□□□□ -0.1
PDGFAP04085 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFAP04085 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFAP04085 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PDGFAP04085 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFAP04085 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFAP04085 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
PDGFAP04085 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
PDGFAP04085 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFAP04085 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFAP04085 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.41□□□□□ -0.1
PDGFAP04085 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
PDGFAP04085 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.41□□□□□ -0.1
PDGFAP04085 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 AC092364.2-201ENST00000596710 2692 ntBASIC14.41□□□□□ -0.1
PDGFAP04085 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.41□□□□□ -0.1
PDGFAP04085 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.41□□□□□ -0.1
PDGFAP04085 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.41□□□□□ -0.1
PDGFAP04085 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.41□□□□□ -0.1
PDGFAP04085 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.41□□□□□ -0.1
PDGFAP04085 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.41□□□□□ -0.1
PDGFAP04085 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
PDGFAP04085 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PDGFAP04085 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 PHKG1P2-201ENST00000457537 863 ntBASIC14.41□□□□□ -0.1
PDGFAP04085 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.41□□□□□ -0.1
PDGFAP04085 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.41□□□□□ -0.1
PDGFAP04085 AC079316.1-201ENST00000548397 411 ntBASIC14.41□□□□□ -0.1
PDGFAP04085 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.41□□□□□ -0.1
PDGFAP04085 HNRNPUP1-201ENST00000554987 333 ntBASIC14.41□□□□□ -0.1
PDGFAP04085 DUX4L45-201ENST00000566406 1057 ntBASIC14.41□□□□□ -0.1
PDGFAP04085 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.41□□□□□ -0.1
PDGFAP04085 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
PDGFAP04085 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.41□□□□□ -0.1
PDGFAP04085 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PDGFAP04085 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
PDGFAP04085 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
PDGFAP04085 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.41□□□□□ -0.1
PDGFAP04085 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
PDGFAP04085 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PDGFAP04085 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PDGFAP04085 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFAP04085 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.41□□□□□ -0.1
PDGFAP04085 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.4□□□□□ -0.1
PDGFAP04085 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PDGFAP04085 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PDGFAP04085 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.4□□□□□ -0.1
PDGFAP04085 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.4□□□□□ -0.1
PDGFAP04085 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.4□□□□□ -0.1
PDGFAP04085 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PDGFAP04085 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PDGFAP04085 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.4□□□□□ -0.1
PDGFAP04085 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.4□□□□□ -0.1
PDGFAP04085 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.4□□□□□ -0.1
PDGFAP04085 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.4□□□□□ -0.1
PDGFAP04085 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.4□□□□□ -0.1
PDGFAP04085 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.4□□□□□ -0.1
PDGFAP04085 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFAP04085 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.4□□□□□ -0.1
PDGFAP04085 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.4□□□□□ -0.1
PDGFAP04085 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.4□□□□□ -0.1
PDGFAP04085 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.4□□□□□ -0.1
PDGFAP04085 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms