Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.36□□□□□ -0.27
UPK1BO75841 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
UPK1BO75841 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
UPK1BO75841 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
UPK1BO75841 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 AC004899.2-201ENST00000622993 3860 ntBASIC13.36□□□□□ -0.27
UPK1BO75841 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.36□□□□□ -0.27
UPK1BO75841 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
UPK1BO75841 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.36□□□□□ -0.27
UPK1BO75841 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.36□□□□□ -0.27
UPK1BO75841 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.36□□□□□ -0.27
UPK1BO75841 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
UPK1BO75841 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.36□□□□□ -0.27
UPK1BO75841 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.36□□□□□ -0.27
UPK1BO75841 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
UPK1BO75841 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK1BO75841 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK1BO75841 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK1BO75841 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
UPK1BO75841 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
UPK1BO75841 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK1BO75841 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK1BO75841 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK1BO75841 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK1BO75841 MINOS1P3-201ENST00000457048 203 ntBASIC13.35□□□□□ -0.27
UPK1BO75841 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK1BO75841 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.35□□□□□ -0.27
UPK1BO75841 EMC9-206ENST00000560403 872 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK1BO75841 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.35□□□□□ -0.27
UPK1BO75841 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 AC114341.1-201ENST00000618070 349 ntBASIC13.35□□□□□ -0.27
UPK1BO75841 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
UPK1BO75841 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.35□□□□□ -0.27
UPK1BO75841 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.35□□□□□ -0.27
UPK1BO75841 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
UPK1BO75841 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.35□□□□□ -0.27
UPK1BO75841 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK1BO75841 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
UPK1BO75841 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK1BO75841 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
UPK1BO75841 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
UPK1BO75841 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK1BO75841 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.35□□□□□ -0.27
UPK1BO75841 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK1BO75841 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK1BO75841 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.34□□□□□ -0.27
UPK1BO75841 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK1BO75841 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.34□□□□□ -0.27
UPK1BO75841 LINC01568-207ENST00000641790 1380 ntBASIC13.34□□□□□ -0.27
UPK1BO75841 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK1BO75841 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.34□□□□□ -0.27
UPK1BO75841 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
UPK1BO75841 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK1BO75841 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UPK1BO75841 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK1BO75841 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK1BO75841 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
UPK1BO75841 AL645929.1-201ENST00000420084 975 ntBASIC13.34□□□□□ -0.27
UPK1BO75841 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
UPK1BO75841 YBX1P2-201ENST00000489612 999 ntBASIC13.34□□□□□ -0.27
UPK1BO75841 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.34□□□□□ -0.27
UPK1BO75841 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.34□□□□□ -0.27
UPK1BO75841 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.34□□□□□ -0.27
UPK1BO75841 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK1BO75841 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
UPK1BO75841 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms