Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH17O14917 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDH17O14917 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH17O14917 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH17O14917 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH17O14917 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH17O14917 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PCDH17O14917 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH17O14917 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PCDH17O14917 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH17O14917 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDH17O14917 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDH17O14917 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDH17O14917 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDH17O14917 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDH17O14917 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDH17O14917 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
PCDH17O14917 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.68□□□□□ -0.06
PCDH17O14917 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDH17O14917 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDH17O14917 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDH17O14917 WASH4P-201ENST00000564273 1246 ntBASIC14.68□□□□□ -0.06
PCDH17O14917 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDH17O14917 CTBP2P3-201ENST00000585629 1255 ntBASIC14.68□□□□□ -0.06
PCDH17O14917 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PCDH17O14917 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PCDH17O14917 AL162274.1-201ENST00000617191 1098 ntBASIC14.68□□□□□ -0.06
PCDH17O14917 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PCDH17O14917 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH17O14917 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH17O14917 AGAP7P-201ENST00000582299 2062 ntBASIC14.68□□□□□ -0.06
PCDH17O14917 AGAP14-201ENST00000624701 2060 ntBASIC14.68□□□□□ -0.06
PCDH17O14917 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH17O14917 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH17O14917 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH17O14917 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDH17O14917 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH17O14917 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH17O14917 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDH17O14917 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDH17O14917 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH17O14917 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PCDH17O14917 AL607033.1-201ENST00000623900 1599 ntBASIC14.68□□□□□ -0.06
PCDH17O14917 AC023908.3-201ENST00000564211 3047 ntBASIC14.68□□□□□ -0.06
PCDH17O14917 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PCDH17O14917 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDH17O14917 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDH17O14917 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDH17O14917 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PCDH17O14917 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PCDH17O14917 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDH17O14917 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDH17O14917 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDH17O14917 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDH17O14917 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PCDH17O14917 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDH17O14917 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 AC134915.1-201ENST00000426461 574 ntBASIC14.67□□□□□ -0.06
PCDH17O14917 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDH17O14917 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDH17O14917 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDH17O14917 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.67□□□□□ -0.06
PCDH17O14917 WFDC1-204ENST00000613603 549 ntBASIC14.67□□□□□ -0.06
PCDH17O14917 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PCDH17O14917 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDH17O14917 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDH17O14917 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDH17O14917 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDH17O14917 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.67□□□□□ -0.06
PCDH17O14917 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 AL365209.1-201ENST00000624418 6473 ntBASIC14.67□□□□□ -0.06
PCDH17O14917 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PCDH17O14917 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDH17O14917 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PCDH17O14917 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH17O14917 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH17O14917 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PCDH17O14917 AC127383.1-201ENST00000444697 1800 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms