Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC011462.4-201ENST00000616866 449 ntBASIC16■□□□□ 0.15
SOX1O00570 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16■□□□□ 0.15
SOX1O00570 AC002044.2-201ENST00000624910 970 ntBASIC16■□□□□ 0.15
SOX1O00570 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16■□□□□ 0.15
SOX1O00570 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SOX1O00570 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16■□□□□ 0.15
SOX1O00570 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16■□□□□ 0.15
SOX1O00570 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SOX1O00570 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16■□□□□ 0.15
SOX1O00570 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SOX1O00570 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SOX1O00570 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16■□□□□ 0.15
SOX1O00570 WASH7P-201ENST00000488147 1351 ntBASIC16■□□□□ 0.15
SOX1O00570 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
SOX1O00570 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.99■□□□□ 0.15
SOX1O00570 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SOX1O00570 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.99■□□□□ 0.15
SOX1O00570 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SOX1O00570 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SOX1O00570 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SOX1O00570 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SOX1O00570 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SOX1O00570 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.99■□□□□ 0.15
SOX1O00570 AC060834.1-201ENST00000443027 2032 ntBASIC15.99■□□□□ 0.15
SOX1O00570 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
SOX1O00570 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SOX1O00570 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SOX1O00570 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
SOX1O00570 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.99■□□□□ 0.15
SOX1O00570 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SOX1O00570 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SOX1O00570 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
SOX1O00570 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.99■□□□□ 0.15
SOX1O00570 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SOX1O00570 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SOX1O00570 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SOX1O00570 ACTG1P19-201ENST00000418987 1116 ntBASIC15.99■□□□□ 0.15
SOX1O00570 AC092580.1-201ENST00000433998 658 ntBASIC15.99■□□□□ 0.15
SOX1O00570 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SOX1O00570 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.99■□□□□ 0.15
SOX1O00570 AC026434.2-201ENST00000506094 1078 ntBASIC15.99■□□□□ 0.15
SOX1O00570 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SOX1O00570 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SOX1O00570 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SOX1O00570 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
SOX1O00570 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SOX1O00570 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.99■□□□□ 0.15
SOX1O00570 AC007952.4-201ENST00000573866 637 ntBASIC15.99■□□□□ 0.15
SOX1O00570 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC15.99■□□□□ 0.15
SOX1O00570 RN7SL121P-201ENST00000584223 273 ntBASIC15.99■□□□□ 0.15
SOX1O00570 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.99■□□□□ 0.15
SOX1O00570 AC009884.2-201ENST00000603110 324 ntBASIC15.99■□□□□ 0.15
SOX1O00570 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC15.99■□□□□ 0.15
SOX1O00570 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SOX1O00570 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.99■□□□□ 0.15
SOX1O00570 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
SOX1O00570 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.99■□□□□ 0.15
SOX1O00570 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SOX1O00570 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SOX1O00570 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX1O00570 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX1O00570 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.98■□□□□ 0.15
SOX1O00570 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.98■□□□□ 0.15
SOX1O00570 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC15.98■□□□□ 0.15
SOX1O00570 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX1O00570 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX1O00570 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX1O00570 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SOX1O00570 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX1O00570 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SOX1O00570 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SOX1O00570 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SOX1O00570 RPL35P9-201ENST00000446059 350 ntBASIC15.98■□□□□ 0.15
SOX1O00570 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC15.98■□□□□ 0.15
SOX1O00570 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SOX1O00570 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.98■□□□□ 0.15
SOX1O00570 AP000322.3-201ENST00000608665 388 ntBASIC15.98■□□□□ 0.15
SOX1O00570 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SOX1O00570 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX1O00570 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SOX1O00570 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX1O00570 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX1O00570 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX1O00570 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
SOX1O00570 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX1O00570 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
SOX1O00570 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX1O00570 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.98■□□□□ 0.15
SOX1O00570 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.98■□□□□ 0.15
SOX1O00570 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
SOX1O00570 AC012313.1-201ENST00000593393 3059 ntBASIC15.98■□□□□ 0.15
SOX1O00570 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SOX1O00570 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SOX1O00570 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX1O00570 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX1O00570 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX1O00570 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SOX1O00570 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SOX1O00570 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX1O00570 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms