Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 LINC02447-202ENST00000501888 2146 ntBASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 ANKRD19P-201ENST00000338192 862 ntBASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 BAATP1-201ENST00000412284 1225 ntBASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 BCRP2-202ENST00000447763 634 ntBASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 AL355994.2-201ENST00000447882 704 ntBASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 BCRP6-201ENST00000510112 632 ntBASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 BCRP7-201ENST00000511549 544 ntBASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 AL583810.1-201ENST00000553344 1045 ntBASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC120045.2-201ENST00000567334 178 ntBASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC124283.3-201ENST00000570869 594 ntBASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 CICP23-201ENST00000605013 2741 ntBASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TMX2-CTNND1H3BSU7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC005912.2-201ENST00000619492 2400 ntBASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC074338.1-201ENST00000416825 156 ntBASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC136604.1-201ENST00000418535 575 ntBASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 AP001889.1-201ENST00000525414 633 ntBASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 AP000812.2-201ENST00000538934 718 ntBASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
TMX2-CTNND1H3BSU7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms