Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM88BA6NKF7 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.38
TMEM88BA6NKF7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.38
TMEM88BA6NKF7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 CICP12-201ENST00000455801 843 ntBASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 AC063952.3-201ENST00000467756 308 ntBASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 EMC4-208ENST00000559078 599 ntTSL 3 BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 AC007952.4-201ENST00000573866 637 ntBASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM88BA6NKF7 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 RN7SKP109-201ENST00000410592 316 ntBASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 ACTG1P19-201ENST00000418987 1116 ntBASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 HLA-DPA2-205ENST00000433582 733 ntBASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 DUX4L50-201ENST00000455245 715 ntBASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 AC026470.1-201ENST00000478038 846 ntBASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 SRP14-204ENST00000558720 780 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 AL138725.1-201ENST00000407347 1314 ntBASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM88BA6NKF7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 AL512306.1-201ENST00000432698 848 ntBASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 HNRNPA1P42-201ENST00000458678 957 ntBASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 AC023906.1-201ENST00000486386 453 ntBASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 AC018629.1-201ENST00000623381 1736 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms