Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC112693.3-201ENST00000624819 1983 ntBASIC16.73■□□□□ 0.27
CCDC66A2RUB6 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 AL355306.1-201ENST00000415580 579 ntBASIC16.73■□□□□ 0.27
CCDC66A2RUB6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 RPS8P6-201ENST00000426177 609 ntBASIC16.73■□□□□ 0.27
CCDC66A2RUB6 AL591424.1-201ENST00000442569 1213 ntBASIC16.73■□□□□ 0.27
CCDC66A2RUB6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 AL135744.1-201ENST00000565098 629 ntBASIC16.73■□□□□ 0.27
CCDC66A2RUB6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 MIR4313-201ENST00000580760 101 ntBASIC16.73■□□□□ 0.27
CCDC66A2RUB6 AC027307.2-201ENST00000591252 911 ntBASIC16.73■□□□□ 0.27
CCDC66A2RUB6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 AGAP7P-201ENST00000582299 2062 ntBASIC16.73■□□□□ 0.27
CCDC66A2RUB6 AGAP14-201ENST00000624701 2060 ntBASIC16.73■□□□□ 0.27
CCDC66A2RUB6 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC66A2RUB6 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 PPT1-213ENST00000641319 2388 ntBASIC16.72■□□□□ 0.27
CCDC66A2RUB6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 FAM220BP-201ENST00000377689 816 ntBASIC16.72■□□□□ 0.27
CCDC66A2RUB6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 AC142381.1-201ENST00000426099 345 ntBASIC16.72■□□□□ 0.27
CCDC66A2RUB6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 FAM86C2P-203ENST00000528684 1004 ntBASIC16.72■□□□□ 0.27
CCDC66A2RUB6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 AC092865.6-201ENST00000642101 219 ntBASIC16.72■□□□□ 0.27
CCDC66A2RUB6 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC66A2RUB6 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 C18orf15-201ENST00000623680 2534 ntBASIC16.71■□□□□ 0.27
CCDC66A2RUB6 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms