Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 RPL28-205ENST00000558131 444 ntTSL 5 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 AC006538.3-201ENST00000612495 578 ntBASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 AC093512.1-201ENST00000617969 520 ntBASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 TCAF2P1-201ENST00000291129 2421 ntBASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 CICP11-201ENST00000434745 2827 ntBASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 AC023824.1-201ENST00000562945 2975 ntBASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 AL133267.1-201ENST00000398220 340 ntBASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 AC015910.1-201ENST00000579400 975 ntBASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 AL590560.3-201ENST00000623350 461 ntBASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 PARN-202ENST00000420015 2360 ntTSL 2 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV1A0A0A0MS02 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms