Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TMEM56-RWDD3S4R434 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.89■□□□□ 0.61
TMEM56-RWDD3S4R434 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM56-RWDD3S4R434 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM56-RWDD3S4R434 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TMEM56-RWDD3S4R434 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM56-RWDD3S4R434 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM56-RWDD3S4R434 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM56-RWDD3S4R434 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
TMEM56-RWDD3S4R434 AC233723.2-201ENST00000623798 2106 ntBASIC18.88■□□□□ 0.61
TMEM56-RWDD3S4R434 KRT18P10-201ENST00000388836 1287 ntBASIC18.88■□□□□ 0.61
TMEM56-RWDD3S4R434 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.88■□□□□ 0.61
TMEM56-RWDD3S4R434 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.88■□□□□ 0.61
TMEM56-RWDD3S4R434 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.88■□□□□ 0.61
TMEM56-RWDD3S4R434 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM56-RWDD3S4R434 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM56-RWDD3S4R434 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TMEM56-RWDD3S4R434 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM56-RWDD3S4R434 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM56-RWDD3S4R434 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM56-RWDD3S4R434 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
TMEM56-RWDD3S4R434 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.87■□□□□ 0.61
TMEM56-RWDD3S4R434 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TMEM56-RWDD3S4R434 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM56-RWDD3S4R434 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TMEM56-RWDD3S4R434 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TMEM56-RWDD3S4R434 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.87■□□□□ 0.61
TMEM56-RWDD3S4R434 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM56-RWDD3S4R434 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM56-RWDD3S4R434 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.87■□□□□ 0.61
TMEM56-RWDD3S4R434 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
TMEM56-RWDD3S4R434 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM56-RWDD3S4R434 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM56-RWDD3S4R434 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM56-RWDD3S4R434 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM56-RWDD3S4R434 ANOS2P-203ENST00000472227 1816 ntBASIC18.86■□□□□ 0.61
TMEM56-RWDD3S4R434 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.86■□□□□ 0.61
TMEM56-RWDD3S4R434 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.86■□□□□ 0.61
TMEM56-RWDD3S4R434 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEM56-RWDD3S4R434 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM56-RWDD3S4R434 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM56-RWDD3S4R434 RP9P-202ENST00000450133 1212 ntBASIC18.86■□□□□ 0.61
TMEM56-RWDD3S4R434 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.86■□□□□ 0.61
TMEM56-RWDD3S4R434 AC092296.2-201ENST00000589470 999 ntBASIC18.86■□□□□ 0.61
TMEM56-RWDD3S4R434 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM56-RWDD3S4R434 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM56-RWDD3S4R434 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM56-RWDD3S4R434 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEM56-RWDD3S4R434 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TMEM56-RWDD3S4R434 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM56-RWDD3S4R434 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TMEM56-RWDD3S4R434 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM56-RWDD3S4R434 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.85■□□□□ 0.61
TMEM56-RWDD3S4R434 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM56-RWDD3S4R434 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM56-RWDD3S4R434 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM56-RWDD3S4R434 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM56-RWDD3S4R434 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM56-RWDD3S4R434 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM56-RWDD3S4R434 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM56-RWDD3S4R434 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM56-RWDD3S4R434 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM56-RWDD3S4R434 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM56-RWDD3S4R434 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM56-RWDD3S4R434 AC092068.2-201ENST00000590491 1708 ntBASIC18.84■□□□□ 0.61
TMEM56-RWDD3S4R434 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TMEM56-RWDD3S4R434 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM56-RWDD3S4R434 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM56-RWDD3S4R434 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.84■□□□□ 0.61
TMEM56-RWDD3S4R434 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM56-RWDD3S4R434 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM56-RWDD3S4R434 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM56-RWDD3S4R434 DUSP8P3-201ENST00000399571 1760 ntBASIC18.83■□□□□ 0.61
TMEM56-RWDD3S4R434 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM56-RWDD3S4R434 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM56-RWDD3S4R434 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TMEM56-RWDD3S4R434 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM56-RWDD3S4R434 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.83■□□□□ 0.6
TMEM56-RWDD3S4R434 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.83■□□□□ 0.6
TMEM56-RWDD3S4R434 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM56-RWDD3S4R434 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM56-RWDD3S4R434 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM56-RWDD3S4R434 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM56-RWDD3S4R434 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM56-RWDD3S4R434 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM56-RWDD3S4R434 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM56-RWDD3S4R434 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM56-RWDD3S4R434 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM56-RWDD3S4R434 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM56-RWDD3S4R434 ECEL1P2-201ENST00000461596 1295 ntBASIC18.82■□□□□ 0.6
TMEM56-RWDD3S4R434 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TMEM56-RWDD3S4R434 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.82■□□□□ 0.6
TMEM56-RWDD3S4R434 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM56-RWDD3S4R434 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM56-RWDD3S4R434 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM56-RWDD3S4R434 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM56-RWDD3S4R434 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM56-RWDD3S4R434 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM56-RWDD3S4R434 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.81■□□□□ 0.6
TMEM56-RWDD3S4R434 AC093536.1-201ENST00000569153 554 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms