Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
TNFRSF11AQ9Y6Q6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TNFRSF11AQ9Y6Q6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC28.53■■■□□ 2.16
TNFRSF11AQ9Y6Q6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC28.53■■■□□ 2.16
TNFRSF11AQ9Y6Q6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
TNFRSF11AQ9Y6Q6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
TNFRSF11AQ9Y6Q6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC28.53■■■□□ 2.16
TNFRSF11AQ9Y6Q6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
TNFRSF11AQ9Y6Q6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC28.53■■■□□ 2.16
TNFRSF11AQ9Y6Q6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC28.53■■■□□ 2.16
TNFRSF11AQ9Y6Q6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC28.53■■■□□ 2.16
TNFRSF11AQ9Y6Q6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
TNFRSF11AQ9Y6Q6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
TNFRSF11AQ9Y6Q6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC28.51■■■□□ 2.15
TNFRSF11AQ9Y6Q6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC28.51■■■□□ 2.15
TNFRSF11AQ9Y6Q6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC28.51■■■□□ 2.15
TNFRSF11AQ9Y6Q6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TNFRSF11AQ9Y6Q6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
TNFRSF11AQ9Y6Q6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC28.5■■■□□ 2.15
TNFRSF11AQ9Y6Q6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TNFRSF11AQ9Y6Q6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TNFRSF11AQ9Y6Q6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC28.5■■■□□ 2.15
TNFRSF11AQ9Y6Q6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
TNFRSF11AQ9Y6Q6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
TNFRSF11AQ9Y6Q6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC28.5■■■□□ 2.15
TNFRSF11AQ9Y6Q6 GRAMD4P7-201ENST00000578182 1232 ntBASIC28.5■■■□□ 2.15
TNFRSF11AQ9Y6Q6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC28.5■■■□□ 2.15
TNFRSF11AQ9Y6Q6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC28.5■■■□□ 2.15
TNFRSF11AQ9Y6Q6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC28.5■■■□□ 2.15
TNFRSF11AQ9Y6Q6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TNFRSF11AQ9Y6Q6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC28.5■■■□□ 2.15
TNFRSF11AQ9Y6Q6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
TNFRSF11AQ9Y6Q6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
TNFRSF11AQ9Y6Q6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC28.49■■■□□ 2.15
TNFRSF11AQ9Y6Q6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
TNFRSF11AQ9Y6Q6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
TNFRSF11AQ9Y6Q6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
TNFRSF11AQ9Y6Q6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
TNFRSF11AQ9Y6Q6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
TNFRSF11AQ9Y6Q6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
TNFRSF11AQ9Y6Q6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
TNFRSF11AQ9Y6Q6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
TNFRSF11AQ9Y6Q6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
TNFRSF11AQ9Y6Q6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
TNFRSF11AQ9Y6Q6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
TNFRSF11AQ9Y6Q6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
TNFRSF11AQ9Y6Q6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC28.47■■■□□ 2.15
TNFRSF11AQ9Y6Q6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
TNFRSF11AQ9Y6Q6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
TNFRSF11AQ9Y6Q6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
TNFRSF11AQ9Y6Q6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC28.47■■■□□ 2.15
TNFRSF11AQ9Y6Q6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC28.47■■■□□ 2.15
TNFRSF11AQ9Y6Q6 AP003733.4-201ENST00000623785 1697 ntBASIC28.47■■■□□ 2.15
TNFRSF11AQ9Y6Q6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
TNFRSF11AQ9Y6Q6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC28.47■■■□□ 2.15
TNFRSF11AQ9Y6Q6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
TNFRSF11AQ9Y6Q6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC28.46■■■□□ 2.15
TNFRSF11AQ9Y6Q6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
TNFRSF11AQ9Y6Q6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
TNFRSF11AQ9Y6Q6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC28.46■■■□□ 2.15
TNFRSF11AQ9Y6Q6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.15
TNFRSF11AQ9Y6Q6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
TNFRSF11AQ9Y6Q6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
TNFRSF11AQ9Y6Q6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
TNFRSF11AQ9Y6Q6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
TNFRSF11AQ9Y6Q6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
TNFRSF11AQ9Y6Q6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
TNFRSF11AQ9Y6Q6 KRT16P3-201ENST00000439127 1283 ntBASIC28.44■■■□□ 2.14
TNFRSF11AQ9Y6Q6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC28.44■■■□□ 2.14
TNFRSF11AQ9Y6Q6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC28.44■■■□□ 2.14
TNFRSF11AQ9Y6Q6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC28.44■■■□□ 2.14
TNFRSF11AQ9Y6Q6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC28.44■■■□□ 2.14
TNFRSF11AQ9Y6Q6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
TNFRSF11AQ9Y6Q6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
TNFRSF11AQ9Y6Q6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
TNFRSF11AQ9Y6Q6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TNFRSF11AQ9Y6Q6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TNFRSF11AQ9Y6Q6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TNFRSF11AQ9Y6Q6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
TNFRSF11AQ9Y6Q6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC28.43■■■□□ 2.14
TNFRSF11AQ9Y6Q6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC28.43■■■□□ 2.14
TNFRSF11AQ9Y6Q6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
TNFRSF11AQ9Y6Q6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC28.43■■■□□ 2.14
TNFRSF11AQ9Y6Q6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
TNFRSF11AQ9Y6Q6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
TNFRSF11AQ9Y6Q6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC28.42■■■□□ 2.14
TNFRSF11AQ9Y6Q6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC28.42■■■□□ 2.14
TNFRSF11AQ9Y6Q6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TNFRSF11AQ9Y6Q6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
TNFRSF11AQ9Y6Q6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
TNFRSF11AQ9Y6Q6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
TNFRSF11AQ9Y6Q6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TNFRSF11AQ9Y6Q6 AC004448.1-201ENST00000458332 883 ntBASIC28.41■■■□□ 2.14
TNFRSF11AQ9Y6Q6 AC010997.5-201ENST00000609182 354 ntBASIC28.41■■■□□ 2.14
TNFRSF11AQ9Y6Q6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TNFRSF11AQ9Y6Q6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
TNFRSF11AQ9Y6Q6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TNFRSF11AQ9Y6Q6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TNFRSF11AQ9Y6Q6 AL139125.2-201ENST00000623134 1869 ntBASIC28.4■■■□□ 2.14
TNFRSF11AQ9Y6Q6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms