Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
CDC42BPBQ9Y5S2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC35.56■■■■□ 3.28
CDC42BPBQ9Y5S2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC35.55■■■■□ 3.28
CDC42BPBQ9Y5S2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
CDC42BPBQ9Y5S2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
CDC42BPBQ9Y5S2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC35.55■■■■□ 3.28
CDC42BPBQ9Y5S2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC35.55■■■■□ 3.28
CDC42BPBQ9Y5S2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC35.54■■■■□ 3.28
CDC42BPBQ9Y5S2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC35.54■■■■□ 3.28
CDC42BPBQ9Y5S2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
CDC42BPBQ9Y5S2 SERBP1P1-201ENST00000396021 1160 ntBASIC35.54■■■■□ 3.28
CDC42BPBQ9Y5S2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC35.53■■■■□ 3.28
CDC42BPBQ9Y5S2 AC097381.1-201ENST00000429019 1296 ntBASIC35.53■■■■□ 3.28
CDC42BPBQ9Y5S2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
CDC42BPBQ9Y5S2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
CDC42BPBQ9Y5S2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
CDC42BPBQ9Y5S2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
CDC42BPBQ9Y5S2 AC091305.1-201ENST00000479476 895 ntBASIC35.52■■■■□ 3.28
CDC42BPBQ9Y5S2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC35.52■■■■□ 3.28
CDC42BPBQ9Y5S2 MAG-206ENST00000597035 542 ntTSL 4 BASIC35.52■■■■□ 3.28
CDC42BPBQ9Y5S2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC35.52■■■■□ 3.28
CDC42BPBQ9Y5S2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC35.52■■■■□ 3.28
CDC42BPBQ9Y5S2 ANKRD20A6P-201ENST00000618763 204 ntBASIC35.52■■■■□ 3.28
CDC42BPBQ9Y5S2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC35.51■■■■□ 3.28
CDC42BPBQ9Y5S2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
CDC42BPBQ9Y5S2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
CDC42BPBQ9Y5S2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
CDC42BPBQ9Y5S2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
CDC42BPBQ9Y5S2 AC087623.3-201ENST00000607047 1098 ntBASIC35.5■■■■□ 3.27
CDC42BPBQ9Y5S2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
CDC42BPBQ9Y5S2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
CDC42BPBQ9Y5S2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC35.49■■■■□ 3.27
CDC42BPBQ9Y5S2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
CDC42BPBQ9Y5S2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC35.49■■■■□ 3.27
CDC42BPBQ9Y5S2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC35.49■■■■□ 3.27
CDC42BPBQ9Y5S2 CA15P2-201ENST00000611168 834 ntBASIC35.49■■■■□ 3.27
CDC42BPBQ9Y5S2 AC011298.3-201ENST00000615796 283 ntBASIC35.49■■■■□ 3.27
CDC42BPBQ9Y5S2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
CDC42BPBQ9Y5S2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC35.48■■■■□ 3.27
CDC42BPBQ9Y5S2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
CDC42BPBQ9Y5S2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC35.48■■■■□ 3.27
CDC42BPBQ9Y5S2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC35.48■■■■□ 3.27
CDC42BPBQ9Y5S2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC35.48■■■■□ 3.27
CDC42BPBQ9Y5S2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
CDC42BPBQ9Y5S2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC35.47■■■■□ 3.27
CDC42BPBQ9Y5S2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC35.47■■■■□ 3.27
CDC42BPBQ9Y5S2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
CDC42BPBQ9Y5S2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC35.46■■■■□ 3.27
CDC42BPBQ9Y5S2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC35.46■■■■□ 3.27
CDC42BPBQ9Y5S2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC35.46■■■■□ 3.27
CDC42BPBQ9Y5S2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC35.46■■■■□ 3.27
CDC42BPBQ9Y5S2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
CDC42BPBQ9Y5S2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC35.46■■■■□ 3.27
CDC42BPBQ9Y5S2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC35.46■■■■□ 3.27
CDC42BPBQ9Y5S2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC35.46■■■■□ 3.27
CDC42BPBQ9Y5S2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC35.46■■■■□ 3.27
CDC42BPBQ9Y5S2 AC027682.1-201ENST00000562846 899 ntBASIC35.46■■■■□ 3.27
CDC42BPBQ9Y5S2 RASA4CP-201ENST00000424092 1398 ntBASIC35.45■■■■□ 3.27
CDC42BPBQ9Y5S2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
CDC42BPBQ9Y5S2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC35.45■■■■□ 3.27
CDC42BPBQ9Y5S2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC35.45■■■■□ 3.27
CDC42BPBQ9Y5S2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC35.45■■■■□ 3.26
CDC42BPBQ9Y5S2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
CDC42BPBQ9Y5S2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
CDC42BPBQ9Y5S2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
CDC42BPBQ9Y5S2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
CDC42BPBQ9Y5S2 SYT6-210ENST00000641643 1587 ntBASIC35.43■■■■□ 3.26
CDC42BPBQ9Y5S2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
CDC42BPBQ9Y5S2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC35.43■■■■□ 3.26
CDC42BPBQ9Y5S2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC35.43■■■■□ 3.26
CDC42BPBQ9Y5S2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC35.42■■■■□ 3.26
CDC42BPBQ9Y5S2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC35.42■■■■□ 3.26
CDC42BPBQ9Y5S2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC35.42■■■■□ 3.26
CDC42BPBQ9Y5S2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC35.42■■■■□ 3.26
CDC42BPBQ9Y5S2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC35.42■■■■□ 3.26
CDC42BPBQ9Y5S2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC35.42■■■■□ 3.26
CDC42BPBQ9Y5S2 C17orf82-201ENST00000623772 1530 ntBASIC35.42■■■■□ 3.26
CDC42BPBQ9Y5S2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC35.41■■■■□ 3.26
CDC42BPBQ9Y5S2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
CDC42BPBQ9Y5S2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC35.41■■■■□ 3.26
CDC42BPBQ9Y5S2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC35.41■■■■□ 3.26
CDC42BPBQ9Y5S2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
CDC42BPBQ9Y5S2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC35.4■■■■□ 3.26
CDC42BPBQ9Y5S2 AL162430.1-201ENST00000480705 870 ntBASIC35.4■■■■□ 3.26
CDC42BPBQ9Y5S2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC35.4■■■■□ 3.26
CDC42BPBQ9Y5S2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC35.4■■■■□ 3.26
CDC42BPBQ9Y5S2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC35.4■■■■□ 3.26
CDC42BPBQ9Y5S2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
CDC42BPBQ9Y5S2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC35.4■■■■□ 3.26
CDC42BPBQ9Y5S2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC35.39■■■■□ 3.26
CDC42BPBQ9Y5S2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CDC42BPBQ9Y5S2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC35.39■■■■□ 3.26
CDC42BPBQ9Y5S2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC35.39■■■■□ 3.26
CDC42BPBQ9Y5S2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CDC42BPBQ9Y5S2 AC099791.2-201ENST00000605725 427 ntBASIC35.39■■■■□ 3.26
CDC42BPBQ9Y5S2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC35.39■■■■□ 3.26
CDC42BPBQ9Y5S2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
CDC42BPBQ9Y5S2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC35.39■■■■□ 3.26
CDC42BPBQ9Y5S2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CDC42BPBQ9Y5S2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms