Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB9Q9Y5E1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHB9Q9Y5E1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHB9Q9Y5E1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDHB9Q9Y5E1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDHB9Q9Y5E1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.49■■□□□ 1.35
PCDHB9Q9Y5E1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHB9Q9Y5E1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHB9Q9Y5E1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHB9Q9Y5E1 AP003733.4-201ENST00000623785 1697 ntBASIC23.48■■□□□ 1.35
PCDHB9Q9Y5E1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHB9Q9Y5E1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHB9Q9Y5E1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHB9Q9Y5E1 AL136116.3-201ENST00000402907 1138 ntBASIC23.48■■□□□ 1.35
PCDHB9Q9Y5E1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDHB9Q9Y5E1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.48■■□□□ 1.35
PCDHB9Q9Y5E1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDHB9Q9Y5E1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
PCDHB9Q9Y5E1 AC021242.3-201ENST00000607598 1377 ntBASIC23.48■■□□□ 1.35
PCDHB9Q9Y5E1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHB9Q9Y5E1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHB9Q9Y5E1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHB9Q9Y5E1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHB9Q9Y5E1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.47■■□□□ 1.35
PCDHB9Q9Y5E1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.47■■□□□ 1.35
PCDHB9Q9Y5E1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.47■■□□□ 1.35
PCDHB9Q9Y5E1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHB9Q9Y5E1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.47■■□□□ 1.35
PCDHB9Q9Y5E1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.47■■□□□ 1.35
PCDHB9Q9Y5E1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
PCDHB9Q9Y5E1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHB9Q9Y5E1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHB9Q9Y5E1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHB9Q9Y5E1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.47■■□□□ 1.35
PCDHB9Q9Y5E1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHB9Q9Y5E1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
PCDHB9Q9Y5E1 AC131281.2-201ENST00000520478 145 ntBASIC23.46■■□□□ 1.35
PCDHB9Q9Y5E1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.46■■□□□ 1.35
PCDHB9Q9Y5E1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
PCDHB9Q9Y5E1 AC092028.1-203ENST00000608262 953 ntBASIC23.46■■□□□ 1.35
PCDHB9Q9Y5E1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
PCDHB9Q9Y5E1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.35
PCDHB9Q9Y5E1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
PCDHB9Q9Y5E1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.45■■□□□ 1.34
PCDHB9Q9Y5E1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHB9Q9Y5E1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHB9Q9Y5E1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.45■■□□□ 1.34
PCDHB9Q9Y5E1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.45■■□□□ 1.34
PCDHB9Q9Y5E1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.45■■□□□ 1.34
PCDHB9Q9Y5E1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
PCDHB9Q9Y5E1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHB9Q9Y5E1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.45■■□□□ 1.34
PCDHB9Q9Y5E1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.45■■□□□ 1.34
PCDHB9Q9Y5E1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHB9Q9Y5E1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHB9Q9Y5E1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.44■■□□□ 1.34
PCDHB9Q9Y5E1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHB9Q9Y5E1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHB9Q9Y5E1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHB9Q9Y5E1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHB9Q9Y5E1 AF131216.4-201ENST00000638924 1588 ntBASIC23.43■■□□□ 1.34
PCDHB9Q9Y5E1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHB9Q9Y5E1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHB9Q9Y5E1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.42■■□□□ 1.34
PCDHB9Q9Y5E1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.42■■□□□ 1.34
PCDHB9Q9Y5E1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.42■■□□□ 1.34
PCDHB9Q9Y5E1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHB9Q9Y5E1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
PCDHB9Q9Y5E1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
PCDHB9Q9Y5E1 HLA-L-211ENST00000482052 1765 ntBASIC23.41■■□□□ 1.34
PCDHB9Q9Y5E1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHB9Q9Y5E1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
PCDHB9Q9Y5E1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.4■■□□□ 1.34
PCDHB9Q9Y5E1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHB9Q9Y5E1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHB9Q9Y5E1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHB9Q9Y5E1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.39■■□□□ 1.33
PCDHB9Q9Y5E1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHB9Q9Y5E1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.39■■□□□ 1.33
PCDHB9Q9Y5E1 AC010997.5-201ENST00000609182 354 ntBASIC23.39■■□□□ 1.33
PCDHB9Q9Y5E1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB9Q9Y5E1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.38■■□□□ 1.33
PCDHB9Q9Y5E1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.38■■□□□ 1.33
PCDHB9Q9Y5E1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.38■■□□□ 1.33
PCDHB9Q9Y5E1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.38■■□□□ 1.33
PCDHB9Q9Y5E1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB9Q9Y5E1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB9Q9Y5E1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB9Q9Y5E1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB9Q9Y5E1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB9Q9Y5E1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB9Q9Y5E1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDHB9Q9Y5E1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDHB9Q9Y5E1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDHB9Q9Y5E1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
PCDHB9Q9Y5E1 AL356740.2-201ENST00000601559 647 ntBASIC23.37■■□□□ 1.33
PCDHB9Q9Y5E1 AC005837.3-201ENST00000612163 286 ntBASIC23.37■■□□□ 1.33
PCDHB9Q9Y5E1 AC135731.1-201ENST00000569415 2548 ntBASIC23.37■■□□□ 1.33
PCDHB9Q9Y5E1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB9Q9Y5E1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms