Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.87
CTDP1Q9Y5B0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CTDP1Q9Y5B0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CTDP1Q9Y5B0 MIR638-201ENST00000385237 100 ntBASIC26.76■■□□□ 1.87
CTDP1Q9Y5B0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CTDP1Q9Y5B0 AC096631.2-201ENST00000436136 790 ntBASIC26.76■■□□□ 1.87
CTDP1Q9Y5B0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.76■■□□□ 1.87
CTDP1Q9Y5B0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.76■■□□□ 1.87
CTDP1Q9Y5B0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.75■■□□□ 1.87
CTDP1Q9Y5B0 SLC6A10P-202ENST00000431994 2058 ntBASIC26.75■■□□□ 1.87
CTDP1Q9Y5B0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CTDP1Q9Y5B0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CTDP1Q9Y5B0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.75■■□□□ 1.87
CTDP1Q9Y5B0 AC091060.1-201ENST00000623524 1766 ntBASIC26.75■■□□□ 1.87
CTDP1Q9Y5B0 AC145676.1-201ENST00000514988 2004 ntBASIC26.75■■□□□ 1.87
CTDP1Q9Y5B0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
CTDP1Q9Y5B0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CTDP1Q9Y5B0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CTDP1Q9Y5B0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.74■■□□□ 1.87
CTDP1Q9Y5B0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.74■■□□□ 1.87
CTDP1Q9Y5B0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.74■■□□□ 1.87
CTDP1Q9Y5B0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CTDP1Q9Y5B0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.74■■□□□ 1.87
CTDP1Q9Y5B0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.74■■□□□ 1.87
CTDP1Q9Y5B0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
CTDP1Q9Y5B0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CTDP1Q9Y5B0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
CTDP1Q9Y5B0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
CTDP1Q9Y5B0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CTDP1Q9Y5B0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CTDP1Q9Y5B0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CTDP1Q9Y5B0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CTDP1Q9Y5B0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.73■■□□□ 1.87
CTDP1Q9Y5B0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
CTDP1Q9Y5B0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
CTDP1Q9Y5B0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.72■■□□□ 1.87
CTDP1Q9Y5B0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.72■■□□□ 1.87
CTDP1Q9Y5B0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
CTDP1Q9Y5B0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CTDP1Q9Y5B0 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.72■■□□□ 1.87
CTDP1Q9Y5B0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.71■■□□□ 1.87
CTDP1Q9Y5B0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CTDP1Q9Y5B0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CTDP1Q9Y5B0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
CTDP1Q9Y5B0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CTDP1Q9Y5B0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
CTDP1Q9Y5B0 AC005703.6-201ENST00000623265 1329 ntBASIC26.7■■□□□ 1.87
CTDP1Q9Y5B0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.7■■□□□ 1.87
CTDP1Q9Y5B0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
CTDP1Q9Y5B0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.7■■□□□ 1.86
CTDP1Q9Y5B0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CTDP1Q9Y5B0 AC110285.6-201ENST00000617652 491 ntBASIC26.7■■□□□ 1.86
CTDP1Q9Y5B0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CTDP1Q9Y5B0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CTDP1Q9Y5B0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CTDP1Q9Y5B0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.69■■□□□ 1.86
CTDP1Q9Y5B0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CTDP1Q9Y5B0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CTDP1Q9Y5B0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.68■■□□□ 1.86
CTDP1Q9Y5B0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.68■■□□□ 1.86
CTDP1Q9Y5B0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.68■■□□□ 1.86
CTDP1Q9Y5B0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.68■■□□□ 1.86
CTDP1Q9Y5B0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CTDP1Q9Y5B0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.67■■□□□ 1.86
CTDP1Q9Y5B0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CTDP1Q9Y5B0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CTDP1Q9Y5B0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CTDP1Q9Y5B0 SRD5A1P1-201ENST00000442297 786 ntBASIC26.67■■□□□ 1.86
CTDP1Q9Y5B0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CTDP1Q9Y5B0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CTDP1Q9Y5B0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
CTDP1Q9Y5B0 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.66■■□□□ 1.86
CTDP1Q9Y5B0 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.66■■□□□ 1.86
CTDP1Q9Y5B0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CTDP1Q9Y5B0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.66■■□□□ 1.86
CTDP1Q9Y5B0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
CTDP1Q9Y5B0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CTDP1Q9Y5B0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CTDP1Q9Y5B0 MIR6089-201ENST00000616698 64 ntBASIC26.65■■□□□ 1.86
CTDP1Q9Y5B0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
CTDP1Q9Y5B0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CTDP1Q9Y5B0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.64■■□□□ 1.86
CTDP1Q9Y5B0 MIR935-201ENST00000401179 91 ntBASIC26.64■■□□□ 1.86
CTDP1Q9Y5B0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.64■■□□□ 1.86
CTDP1Q9Y5B0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.64■■□□□ 1.86
CTDP1Q9Y5B0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
CTDP1Q9Y5B0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.64■■□□□ 1.85
CTDP1Q9Y5B0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
CTDP1Q9Y5B0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CTDP1Q9Y5B0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.63■■□□□ 1.85
CTDP1Q9Y5B0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.63■■□□□ 1.85
CTDP1Q9Y5B0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CTDP1Q9Y5B0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CTDP1Q9Y5B0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CTDP1Q9Y5B0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CTDP1Q9Y5B0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.62■■□□□ 1.85
CTDP1Q9Y5B0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CTDP1Q9Y5B0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.62■■□□□ 1.85
CTDP1Q9Y5B0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.62■■□□□ 1.85
CTDP1Q9Y5B0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms