Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSM4Q9Y4Z0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSM4Q9Y4Z0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.43■□□□□ 0.54
LSM4Q9Y4Z0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LSM4Q9Y4Z0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.43■□□□□ 0.54
LSM4Q9Y4Z0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSM4Q9Y4Z0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.42■□□□□ 0.54
LSM4Q9Y4Z0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LSM4Q9Y4Z0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSM4Q9Y4Z0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSM4Q9Y4Z0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSM4Q9Y4Z0 SPCS2P3-201ENST00000500401 656 ntBASIC18.42■□□□□ 0.54
LSM4Q9Y4Z0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSM4Q9Y4Z0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSM4Q9Y4Z0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LSM4Q9Y4Z0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LSM4Q9Y4Z0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LSM4Q9Y4Z0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
LSM4Q9Y4Z0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.41■□□□□ 0.54
LSM4Q9Y4Z0 AC010980.1-201ENST00000587192 1142 ntBASIC18.41■□□□□ 0.54
LSM4Q9Y4Z0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LSM4Q9Y4Z0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.41■□□□□ 0.54
LSM4Q9Y4Z0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LSM4Q9Y4Z0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.41■□□□□ 0.54
LSM4Q9Y4Z0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LSM4Q9Y4Z0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LSM4Q9Y4Z0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM4Q9Y4Z0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LSM4Q9Y4Z0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM4Q9Y4Z0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM4Q9Y4Z0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LSM4Q9Y4Z0 MIR3960-201ENST00000583311 91 ntBASIC18.4■□□□□ 0.54
LSM4Q9Y4Z0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.4■□□□□ 0.54
LSM4Q9Y4Z0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LSM4Q9Y4Z0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
LSM4Q9Y4Z0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM4Q9Y4Z0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM4Q9Y4Z0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LSM4Q9Y4Z0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM4Q9Y4Z0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM4Q9Y4Z0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LSM4Q9Y4Z0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM4Q9Y4Z0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.39■□□□□ 0.53
LSM4Q9Y4Z0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LSM4Q9Y4Z0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.39■□□□□ 0.53
LSM4Q9Y4Z0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.39■□□□□ 0.53
LSM4Q9Y4Z0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM4Q9Y4Z0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM4Q9Y4Z0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.39■□□□□ 0.53
LSM4Q9Y4Z0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM4Q9Y4Z0 HLA-L-211ENST00000482052 1765 ntBASIC18.39■□□□□ 0.53
LSM4Q9Y4Z0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM4Q9Y4Z0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LSM4Q9Y4Z0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LSM4Q9Y4Z0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM4Q9Y4Z0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM4Q9Y4Z0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LSM4Q9Y4Z0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM4Q9Y4Z0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM4Q9Y4Z0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.38■□□□□ 0.53
LSM4Q9Y4Z0 MIR6765-201ENST00000614092 87 ntBASIC18.38■□□□□ 0.53
LSM4Q9Y4Z0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
LSM4Q9Y4Z0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LSM4Q9Y4Z0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LSM4Q9Y4Z0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM4Q9Y4Z0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM4Q9Y4Z0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM4Q9Y4Z0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM4Q9Y4Z0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM4Q9Y4Z0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM4Q9Y4Z0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.37■□□□□ 0.53
LSM4Q9Y4Z0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM4Q9Y4Z0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM4Q9Y4Z0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM4Q9Y4Z0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM4Q9Y4Z0 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.37■□□□□ 0.53
LSM4Q9Y4Z0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM4Q9Y4Z0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM4Q9Y4Z0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM4Q9Y4Z0 AC139795.1-202ENST00000500444 432 ntBASIC18.36■□□□□ 0.53
LSM4Q9Y4Z0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.36■□□□□ 0.53
LSM4Q9Y4Z0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.36■□□□□ 0.53
LSM4Q9Y4Z0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LSM4Q9Y4Z0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LSM4Q9Y4Z0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.35■□□□□ 0.53
LSM4Q9Y4Z0 KRT8P33-201ENST00000508125 1423 ntBASIC18.35■□□□□ 0.53
LSM4Q9Y4Z0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSM4Q9Y4Z0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSM4Q9Y4Z0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSM4Q9Y4Z0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LSM4Q9Y4Z0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LSM4Q9Y4Z0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM4Q9Y4Z0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM4Q9Y4Z0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LSM4Q9Y4Z0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM4Q9Y4Z0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM4Q9Y4Z0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM4Q9Y4Z0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM4Q9Y4Z0 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.34■□□□□ 0.53
LSM4Q9Y4Z0 AC103834.1-201ENST00000520383 144 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms