Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.9■■□□□ 1.1
LRCH1Q9Y2L9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.9■■□□□ 1.1
LRCH1Q9Y2L9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LRCH1Q9Y2L9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.9■■□□□ 1.1
LRCH1Q9Y2L9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRCH1Q9Y2L9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRCH1Q9Y2L9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRCH1Q9Y2L9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRCH1Q9Y2L9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
LRCH1Q9Y2L9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
LRCH1Q9Y2L9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LRCH1Q9Y2L9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LRCH1Q9Y2L9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.89■■□□□ 1.09
LRCH1Q9Y2L9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LRCH1Q9Y2L9 LINC00273-201ENST00000539813 1452 ntBASIC21.89■■□□□ 1.09
LRCH1Q9Y2L9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LRCH1Q9Y2L9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
LRCH1Q9Y2L9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRCH1Q9Y2L9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRCH1Q9Y2L9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRCH1Q9Y2L9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
LRCH1Q9Y2L9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.88■■□□□ 1.09
LRCH1Q9Y2L9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRCH1Q9Y2L9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.88■■□□□ 1.09
LRCH1Q9Y2L9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
LRCH1Q9Y2L9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
LRCH1Q9Y2L9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
LRCH1Q9Y2L9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
LRCH1Q9Y2L9 MIR7108-201ENST00000614319 87 ntBASIC21.87■■□□□ 1.09
LRCH1Q9Y2L9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRCH1Q9Y2L9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.87■■□□□ 1.09
LRCH1Q9Y2L9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRCH1Q9Y2L9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRCH1Q9Y2L9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
LRCH1Q9Y2L9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
LRCH1Q9Y2L9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.87■■□□□ 1.09
LRCH1Q9Y2L9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRCH1Q9Y2L9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LRCH1Q9Y2L9 ZNRF2P2-203ENST00000454624 420 ntBASIC21.86■■□□□ 1.09
LRCH1Q9Y2L9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRCH1Q9Y2L9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRCH1Q9Y2L9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRCH1Q9Y2L9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.85■■□□□ 1.09
LRCH1Q9Y2L9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRCH1Q9Y2L9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.85■■□□□ 1.09
LRCH1Q9Y2L9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRCH1Q9Y2L9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRCH1Q9Y2L9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRCH1Q9Y2L9 AC021231.2-201ENST00000594613 730 ntBASIC21.85■■□□□ 1.09
LRCH1Q9Y2L9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
LRCH1Q9Y2L9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRCH1Q9Y2L9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.85■■□□□ 1.09
LRCH1Q9Y2L9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRCH1Q9Y2L9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRCH1Q9Y2L9 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRCH1Q9Y2L9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRCH1Q9Y2L9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.84■■□□□ 1.09
LRCH1Q9Y2L9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LRCH1Q9Y2L9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LRCH1Q9Y2L9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRCH1Q9Y2L9 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.84■■□□□ 1.09
LRCH1Q9Y2L9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
LRCH1Q9Y2L9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LRCH1Q9Y2L9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRCH1Q9Y2L9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRCH1Q9Y2L9 PKD1P6-201ENST00000343738 4769 ntBASIC21.83■■□□□ 1.09
LRCH1Q9Y2L9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRCH1Q9Y2L9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRCH1Q9Y2L9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRCH1Q9Y2L9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.83■■□□□ 1.09
LRCH1Q9Y2L9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRCH1Q9Y2L9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LRCH1Q9Y2L9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LRCH1Q9Y2L9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.83■■□□□ 1.08
LRCH1Q9Y2L9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.82■■□□□ 1.08
LRCH1Q9Y2L9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRCH1Q9Y2L9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
LRCH1Q9Y2L9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.82■■□□□ 1.08
LRCH1Q9Y2L9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRCH1Q9Y2L9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.82■■□□□ 1.08
LRCH1Q9Y2L9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
LRCH1Q9Y2L9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRCH1Q9Y2L9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRCH1Q9Y2L9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.82■■□□□ 1.08
LRCH1Q9Y2L9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRCH1Q9Y2L9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
LRCH1Q9Y2L9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRCH1Q9Y2L9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRCH1Q9Y2L9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.81■■□□□ 1.08
LRCH1Q9Y2L9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.81■■□□□ 1.08
LRCH1Q9Y2L9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRCH1Q9Y2L9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
LRCH1Q9Y2L9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRCH1Q9Y2L9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRCH1Q9Y2L9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRCH1Q9Y2L9 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRCH1Q9Y2L9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.8■■□□□ 1.08
LRCH1Q9Y2L9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRCH1Q9Y2L9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRCH1Q9Y2L9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms