Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
NINLQ9Y2I6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC31.89■■■□□ 2.7
NINLQ9Y2I6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC31.89■■■□□ 2.7
NINLQ9Y2I6 RASSF1-AS1-201ENST00000629828 790 ntBASIC31.89■■■□□ 2.7
NINLQ9Y2I6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC31.88■■■□□ 2.69
NINLQ9Y2I6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
NINLQ9Y2I6 AL136116.3-201ENST00000402907 1138 ntBASIC31.88■■■□□ 2.69
NINLQ9Y2I6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
NINLQ9Y2I6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
NINLQ9Y2I6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC31.88■■■□□ 2.69
NINLQ9Y2I6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
NINLQ9Y2I6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC31.87■■■□□ 2.69
NINLQ9Y2I6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
NINLQ9Y2I6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
NINLQ9Y2I6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
NINLQ9Y2I6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
NINLQ9Y2I6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
NINLQ9Y2I6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
NINLQ9Y2I6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC31.86■■■□□ 2.69
NINLQ9Y2I6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC31.86■■■□□ 2.69
NINLQ9Y2I6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
NINLQ9Y2I6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC31.85■■■□□ 2.69
NINLQ9Y2I6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
NINLQ9Y2I6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC31.85■■■□□ 2.69
NINLQ9Y2I6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC31.85■■■□□ 2.69
NINLQ9Y2I6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NINLQ9Y2I6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NINLQ9Y2I6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
NINLQ9Y2I6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
NINLQ9Y2I6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC31.84■■■□□ 2.69
NINLQ9Y2I6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
NINLQ9Y2I6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
NINLQ9Y2I6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NINLQ9Y2I6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NINLQ9Y2I6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
NINLQ9Y2I6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NINLQ9Y2I6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC31.84■■■□□ 2.69
NINLQ9Y2I6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
NINLQ9Y2I6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
NINLQ9Y2I6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
NINLQ9Y2I6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
NINLQ9Y2I6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
NINLQ9Y2I6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC31.82■■■□□ 2.69
NINLQ9Y2I6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC31.82■■■□□ 2.69
NINLQ9Y2I6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC31.82■■■□□ 2.69
NINLQ9Y2I6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC31.82■■■□□ 2.69
NINLQ9Y2I6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC31.82■■■□□ 2.69
NINLQ9Y2I6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC31.82■■■□□ 2.69
NINLQ9Y2I6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
NINLQ9Y2I6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
NINLQ9Y2I6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
NINLQ9Y2I6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
NINLQ9Y2I6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC31.81■■■□□ 2.68
NINLQ9Y2I6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC31.81■■■□□ 2.68
NINLQ9Y2I6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
NINLQ9Y2I6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC31.81■■■□□ 2.68
NINLQ9Y2I6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC31.81■■■□□ 2.68
NINLQ9Y2I6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
NINLQ9Y2I6 AL161729.1-201ENST00000604104 1402 ntBASIC31.8■■■□□ 2.68
NINLQ9Y2I6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
NINLQ9Y2I6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
NINLQ9Y2I6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC31.79■■■□□ 2.68
NINLQ9Y2I6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
NINLQ9Y2I6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
NINLQ9Y2I6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
NINLQ9Y2I6 AC005703.6-201ENST00000623265 1329 ntBASIC31.78■■■□□ 2.68
NINLQ9Y2I6 AL022069.1-201ENST00000568025 1636 ntBASIC31.78■■■□□ 2.68
NINLQ9Y2I6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC31.78■■■□□ 2.68
NINLQ9Y2I6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
NINLQ9Y2I6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC31.78■■■□□ 2.68
NINLQ9Y2I6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NINLQ9Y2I6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC31.77■■■□□ 2.68
NINLQ9Y2I6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
NINLQ9Y2I6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
NINLQ9Y2I6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
NINLQ9Y2I6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC31.76■■■□□ 2.67
NINLQ9Y2I6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
NINLQ9Y2I6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
NINLQ9Y2I6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
NINLQ9Y2I6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
NINLQ9Y2I6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
NINLQ9Y2I6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
NINLQ9Y2I6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
NINLQ9Y2I6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
NINLQ9Y2I6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC31.73■■■□□ 2.67
NINLQ9Y2I6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC31.73■■■□□ 2.67
NINLQ9Y2I6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
NINLQ9Y2I6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
NINLQ9Y2I6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
NINLQ9Y2I6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC31.72■■■□□ 2.67
NINLQ9Y2I6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
NINLQ9Y2I6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
NINLQ9Y2I6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
NINLQ9Y2I6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC31.71■■■□□ 2.67
NINLQ9Y2I6 REST-206ENST00000612429 1376 ntTSL 5 BASIC31.71■■■□□ 2.67
NINLQ9Y2I6 REST-207ENST00000616975 1370 ntTSL 5 BASIC31.71■■■□□ 2.67
NINLQ9Y2I6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
NINLQ9Y2I6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
NINLQ9Y2I6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
NINLQ9Y2I6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms