Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NCKAP1Q9Y2A7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.21■■□□□ 1.31
NCKAP1Q9Y2A7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCKAP1Q9Y2A7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.21■■□□□ 1.31
NCKAP1Q9Y2A7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCKAP1Q9Y2A7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NCKAP1Q9Y2A7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
NCKAP1Q9Y2A7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NCKAP1Q9Y2A7 AC005703.6-201ENST00000623265 1329 ntBASIC23.2■■□□□ 1.3
NCKAP1Q9Y2A7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NCKAP1Q9Y2A7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.2■■□□□ 1.3
NCKAP1Q9Y2A7 SLC6A10P-202ENST00000431994 2058 ntBASIC23.2■■□□□ 1.3
NCKAP1Q9Y2A7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NCKAP1Q9Y2A7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.19■■□□□ 1.3
NCKAP1Q9Y2A7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.19■■□□□ 1.3
NCKAP1Q9Y2A7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.18■■□□□ 1.3
NCKAP1Q9Y2A7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
NCKAP1Q9Y2A7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NCKAP1Q9Y2A7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NCKAP1Q9Y2A7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NCKAP1Q9Y2A7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NCKAP1Q9Y2A7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NCKAP1Q9Y2A7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.17■■□□□ 1.3
NCKAP1Q9Y2A7 MIR935-201ENST00000401179 91 ntBASIC23.17■■□□□ 1.3
NCKAP1Q9Y2A7 SRD5A1P1-201ENST00000442297 786 ntBASIC23.17■■□□□ 1.3
NCKAP1Q9Y2A7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.17■■□□□ 1.3
NCKAP1Q9Y2A7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.17■■□□□ 1.3
NCKAP1Q9Y2A7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NCKAP1Q9Y2A7 AC145676.1-201ENST00000514988 2004 ntBASIC23.16■■□□□ 1.3
NCKAP1Q9Y2A7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NCKAP1Q9Y2A7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.16■■□□□ 1.3
NCKAP1Q9Y2A7 AC005837.3-201ENST00000612163 286 ntBASIC23.16■■□□□ 1.3
NCKAP1Q9Y2A7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.16■■□□□ 1.3
NCKAP1Q9Y2A7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.16■■□□□ 1.3
NCKAP1Q9Y2A7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NCKAP1Q9Y2A7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NCKAP1Q9Y2A7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.16■■□□□ 1.3
NCKAP1Q9Y2A7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.16■■□□□ 1.3
NCKAP1Q9Y2A7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NCKAP1Q9Y2A7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NCKAP1Q9Y2A7 AC133561.4-201ENST00000566112 224 ntBASIC23.15■■□□□ 1.3
NCKAP1Q9Y2A7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.15■■□□□ 1.3
NCKAP1Q9Y2A7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NCKAP1Q9Y2A7 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.14■■□□□ 1.3
NCKAP1Q9Y2A7 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.14■■□□□ 1.3
NCKAP1Q9Y2A7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NCKAP1Q9Y2A7 AC091060.1-201ENST00000623524 1766 ntBASIC23.14■■□□□ 1.3
NCKAP1Q9Y2A7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
NCKAP1Q9Y2A7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NCKAP1Q9Y2A7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.14■■□□□ 1.29
NCKAP1Q9Y2A7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.14■■□□□ 1.29
NCKAP1Q9Y2A7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.14■■□□□ 1.29
NCKAP1Q9Y2A7 MIR6089-201ENST00000616698 64 ntBASIC23.14■■□□□ 1.29
NCKAP1Q9Y2A7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NCKAP1Q9Y2A7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
NCKAP1Q9Y2A7 AC135731.1-201ENST00000569415 2548 ntBASIC23.13■■□□□ 1.29
NCKAP1Q9Y2A7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.13■■□□□ 1.29
NCKAP1Q9Y2A7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.13■■□□□ 1.29
NCKAP1Q9Y2A7 PBX2P1-201ENST00000493219 1291 ntBASIC23.13■■□□□ 1.29
NCKAP1Q9Y2A7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
NCKAP1Q9Y2A7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NCKAP1Q9Y2A7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NCKAP1Q9Y2A7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NCKAP1Q9Y2A7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NCKAP1Q9Y2A7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NCKAP1Q9Y2A7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.12■■□□□ 1.29
NCKAP1Q9Y2A7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NCKAP1Q9Y2A7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.12■■□□□ 1.29
NCKAP1Q9Y2A7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NCKAP1Q9Y2A7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NCKAP1Q9Y2A7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.12■■□□□ 1.29
NCKAP1Q9Y2A7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
NCKAP1Q9Y2A7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NCKAP1Q9Y2A7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.11■■□□□ 1.29
NCKAP1Q9Y2A7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NCKAP1Q9Y2A7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
NCKAP1Q9Y2A7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.11■■□□□ 1.29
NCKAP1Q9Y2A7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
NCKAP1Q9Y2A7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NCKAP1Q9Y2A7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NCKAP1Q9Y2A7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.11■■□□□ 1.29
NCKAP1Q9Y2A7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
NCKAP1Q9Y2A7 AL022069.1-201ENST00000568025 1636 ntBASIC23.11■■□□□ 1.29
NCKAP1Q9Y2A7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NCKAP1Q9Y2A7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
NCKAP1Q9Y2A7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NCKAP1Q9Y2A7 AC131274.2-201ENST00000580697 1507 ntBASIC23.1■■□□□ 1.29
NCKAP1Q9Y2A7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NCKAP1Q9Y2A7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NCKAP1Q9Y2A7 UNC93B3-201ENST00000308076 687 ntBASIC23.1■■□□□ 1.29
NCKAP1Q9Y2A7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
NCKAP1Q9Y2A7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.1■■□□□ 1.29
NCKAP1Q9Y2A7 AC106739.1-201ENST00000617035 715 ntBASIC23.1■■□□□ 1.29
NCKAP1Q9Y2A7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NCKAP1Q9Y2A7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NCKAP1Q9Y2A7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
NCKAP1Q9Y2A7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.09■■□□□ 1.29
NCKAP1Q9Y2A7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.09■■□□□ 1.29
NCKAP1Q9Y2A7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.09■■□□□ 1.29
NCKAP1Q9Y2A7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms