Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERGIC3Q9Y282 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ERGIC3Q9Y282 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ERGIC3Q9Y282 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERGIC3Q9Y282 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERGIC3Q9Y282 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERGIC3Q9Y282 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.96■□□□□ 0.95
ERGIC3Q9Y282 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.96■□□□□ 0.95
ERGIC3Q9Y282 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERGIC3Q9Y282 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.96■□□□□ 0.95
ERGIC3Q9Y282 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ERGIC3Q9Y282 AC007375.3-201ENST00000600936 2314 ntBASIC20.96■□□□□ 0.95
ERGIC3Q9Y282 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERGIC3Q9Y282 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.96■□□□□ 0.95
ERGIC3Q9Y282 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ERGIC3Q9Y282 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
ERGIC3Q9Y282 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
ERGIC3Q9Y282 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 PKD1P6-201ENST00000343738 4769 ntBASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 DUX4L13-201ENST00000554103 1267 ntBASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 DUX4L15-201ENST00000611059 1267 ntBASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 DUX4L23-201ENST00000615195 1269 ntBASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 DUX4L24-201ENST00000617576 1269 ntBASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 LINC01971-201ENST00000617888 1048 ntBASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 DUX4L22-201ENST00000618238 1269 ntBASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 DUX4L20-201ENST00000619712 1269 ntBASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 DUX4L21-201ENST00000622058 1269 ntBASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 DUX4L10-201ENST00000622460 1267 ntBASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 DUX4L25-201ENST00000624915 1269 ntBASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ERGIC3Q9Y282 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERGIC3Q9Y282 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ERGIC3Q9Y282 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERGIC3Q9Y282 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERGIC3Q9Y282 AL162393.1-201ENST00000437852 946 ntBASIC20.94■□□□□ 0.94
ERGIC3Q9Y282 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ERGIC3Q9Y282 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.94■□□□□ 0.94
ERGIC3Q9Y282 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERGIC3Q9Y282 AL121603.2-201ENST00000557373 2117 ntBASIC20.93■□□□□ 0.94
ERGIC3Q9Y282 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.93■□□□□ 0.94
ERGIC3Q9Y282 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERGIC3Q9Y282 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERGIC3Q9Y282 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERGIC3Q9Y282 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
ERGIC3Q9Y282 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.93■□□□□ 0.94
ERGIC3Q9Y282 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.93■□□□□ 0.94
ERGIC3Q9Y282 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERGIC3Q9Y282 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.93■□□□□ 0.94
ERGIC3Q9Y282 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERGIC3Q9Y282 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERGIC3Q9Y282 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERGIC3Q9Y282 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.92■□□□□ 0.94
ERGIC3Q9Y282 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.92■□□□□ 0.94
ERGIC3Q9Y282 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ERGIC3Q9Y282 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
ERGIC3Q9Y282 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERGIC3Q9Y282 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERGIC3Q9Y282 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERGIC3Q9Y282 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ERGIC3Q9Y282 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERGIC3Q9Y282 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ERGIC3Q9Y282 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ERGIC3Q9Y282 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ERGIC3Q9Y282 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
ERGIC3Q9Y282 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ERGIC3Q9Y282 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ERGIC3Q9Y282 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERGIC3Q9Y282 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERGIC3Q9Y282 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ERGIC3Q9Y282 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ERGIC3Q9Y282 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
ERGIC3Q9Y282 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERGIC3Q9Y282 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERGIC3Q9Y282 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.9■□□□□ 0.94
ERGIC3Q9Y282 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ERGIC3Q9Y282 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERGIC3Q9Y282 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ERGIC3Q9Y282 AC126177.7-201ENST00000547904 679 ntBASIC20.9■□□□□ 0.94
ERGIC3Q9Y282 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.9■□□□□ 0.94
ERGIC3Q9Y282 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERGIC3Q9Y282 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.9■□□□□ 0.94
ERGIC3Q9Y282 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERGIC3Q9Y282 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ERGIC3Q9Y282 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ERGIC3Q9Y282 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ERGIC3Q9Y282 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERGIC3Q9Y282 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERGIC3Q9Y282 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.89■□□□□ 0.93
ERGIC3Q9Y282 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
ERGIC3Q9Y282 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERGIC3Q9Y282 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms