Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC28.27■■■□□ 2.12
HMG20BQ9P0W2 MTDHP2-201ENST00000601468 714 ntBASIC28.27■■■□□ 2.12
HMG20BQ9P0W2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC28.27■■■□□ 2.12
HMG20BQ9P0W2 AC138932.3-201ENST00000567634 1902 ntBASIC28.27■■■□□ 2.12
HMG20BQ9P0W2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
HMG20BQ9P0W2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
HMG20BQ9P0W2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC28.27■■■□□ 2.12
HMG20BQ9P0W2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC28.27■■■□□ 2.12
HMG20BQ9P0W2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
HMG20BQ9P0W2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC28.26■■■□□ 2.11
HMG20BQ9P0W2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.26■■■□□ 2.11
HMG20BQ9P0W2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
HMG20BQ9P0W2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
HMG20BQ9P0W2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC28.25■■■□□ 2.11
HMG20BQ9P0W2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC28.25■■■□□ 2.11
HMG20BQ9P0W2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
HMG20BQ9P0W2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
HMG20BQ9P0W2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC28.24■■■□□ 2.11
HMG20BQ9P0W2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC28.24■■■□□ 2.11
HMG20BQ9P0W2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC28.24■■■□□ 2.11
HMG20BQ9P0W2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
HMG20BQ9P0W2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
HMG20BQ9P0W2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC28.23■■■□□ 2.11
HMG20BQ9P0W2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
HMG20BQ9P0W2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
HMG20BQ9P0W2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC28.22■■■□□ 2.11
HMG20BQ9P0W2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
HMG20BQ9P0W2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
HMG20BQ9P0W2 MIR6724-1-201ENST00000616420 92 ntBASIC28.21■■■□□ 2.11
HMG20BQ9P0W2 MIR6724-2-201ENST00000616483 92 ntBASIC28.21■■■□□ 2.11
HMG20BQ9P0W2 MIR6724-4-201ENST00000617390 92 ntBASIC28.21■■■□□ 2.11
HMG20BQ9P0W2 MIR6724-3-201ENST00000622482 92 ntBASIC28.21■■■□□ 2.11
HMG20BQ9P0W2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
HMG20BQ9P0W2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
HMG20BQ9P0W2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC28.2■■■□□ 2.1
HMG20BQ9P0W2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC28.2■■■□□ 2.1
HMG20BQ9P0W2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
HMG20BQ9P0W2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC28.19■■■□□ 2.1
HMG20BQ9P0W2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
HMG20BQ9P0W2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC28.19■■■□□ 2.1
HMG20BQ9P0W2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
HMG20BQ9P0W2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC28.18■■■□□ 2.1
HMG20BQ9P0W2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
HMG20BQ9P0W2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC28.18■■■□□ 2.1
HMG20BQ9P0W2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC28.18■■■□□ 2.1
HMG20BQ9P0W2 AL117332.1-201ENST00000622628 974 ntBASIC28.18■■■□□ 2.1
HMG20BQ9P0W2 AP003733.4-201ENST00000623785 1697 ntBASIC28.18■■■□□ 2.1
HMG20BQ9P0W2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
HMG20BQ9P0W2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC28.17■■■□□ 2.1
HMG20BQ9P0W2 CD72-202ENST00000378430 585 ntTSL 3 BASIC28.17■■■□□ 2.1
HMG20BQ9P0W2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
HMG20BQ9P0W2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC28.17■■■□□ 2.1
HMG20BQ9P0W2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC28.17■■■□□ 2.1
HMG20BQ9P0W2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC28.17■■■□□ 2.1
HMG20BQ9P0W2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
HMG20BQ9P0W2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
HMG20BQ9P0W2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
HMG20BQ9P0W2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC28.16■■■□□ 2.1
HMG20BQ9P0W2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC28.16■■■□□ 2.1
HMG20BQ9P0W2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
HMG20BQ9P0W2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC28.16■■■□□ 2.1
HMG20BQ9P0W2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC28.16■■■□□ 2.1
HMG20BQ9P0W2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
HMG20BQ9P0W2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC28.16■■■□□ 2.1
HMG20BQ9P0W2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
HMG20BQ9P0W2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
HMG20BQ9P0W2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
HMG20BQ9P0W2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
HMG20BQ9P0W2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
HMG20BQ9P0W2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
HMG20BQ9P0W2 AC131274.2-201ENST00000580697 1507 ntBASIC28.15■■■□□ 2.1
HMG20BQ9P0W2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
HMG20BQ9P0W2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
HMG20BQ9P0W2 AC004448.1-201ENST00000458332 883 ntBASIC28.15■■■□□ 2.1
HMG20BQ9P0W2 MIR6722-201ENST00000617286 78 ntBASIC28.15■■■□□ 2.1
HMG20BQ9P0W2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC28.15■■■□□ 2.1
HMG20BQ9P0W2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC28.14■■■□□ 2.1
HMG20BQ9P0W2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
HMG20BQ9P0W2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
HMG20BQ9P0W2 MIR3621-201ENST00000580529 85 ntBASIC28.14■■■□□ 2.1
HMG20BQ9P0W2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
HMG20BQ9P0W2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.09
HMG20BQ9P0W2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
HMG20BQ9P0W2 AC135731.1-201ENST00000569415 2548 ntBASIC28.13■■■□□ 2.09
HMG20BQ9P0W2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
HMG20BQ9P0W2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
HMG20BQ9P0W2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
HMG20BQ9P0W2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
HMG20BQ9P0W2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.12■■■□□ 2.09
HMG20BQ9P0W2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC28.12■■■□□ 2.09
HMG20BQ9P0W2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC28.12■■■□□ 2.09
HMG20BQ9P0W2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC28.12■■■□□ 2.09
HMG20BQ9P0W2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC28.12■■■□□ 2.09
HMG20BQ9P0W2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC28.12■■■□□ 2.09
HMG20BQ9P0W2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
HMG20BQ9P0W2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
HMG20BQ9P0W2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
HMG20BQ9P0W2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC28.11■■■□□ 2.09
HMG20BQ9P0W2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC28.11■■■□□ 2.09
HMG20BQ9P0W2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms