Protein–RNA interactions for Protein: Q9NZ09

UBAP1, Ubiquitin-associated protein 1, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1Q9NZ09 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
UBAP1Q9NZ09 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.65■■□□□ 1.06
UBAP1Q9NZ09 CR559946.2-201ENST00000623684 991 ntBASIC21.65■■□□□ 1.06
UBAP1Q9NZ09 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.65■■□□□ 1.06
UBAP1Q9NZ09 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
UBAP1Q9NZ09 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBAP1Q9NZ09 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
UBAP1Q9NZ09 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
UBAP1Q9NZ09 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.64■■□□□ 1.06
UBAP1Q9NZ09 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
UBAP1Q9NZ09 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
UBAP1Q9NZ09 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.64■■□□□ 1.05
UBAP1Q9NZ09 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBAP1Q9NZ09 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBAP1Q9NZ09 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBAP1Q9NZ09 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UBAP1Q9NZ09 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBAP1Q9NZ09 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UBAP1Q9NZ09 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
UBAP1Q9NZ09 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBAP1Q9NZ09 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
UBAP1Q9NZ09 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.63■■□□□ 1.05
UBAP1Q9NZ09 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.63■■□□□ 1.05
UBAP1Q9NZ09 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
UBAP1Q9NZ09 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBAP1Q9NZ09 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.63■■□□□ 1.05
UBAP1Q9NZ09 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBAP1Q9NZ09 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UBAP1Q9NZ09 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBAP1Q9NZ09 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UBAP1Q9NZ09 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UBAP1Q9NZ09 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBAP1Q9NZ09 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.62■■□□□ 1.05
UBAP1Q9NZ09 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.62■■□□□ 1.05
UBAP1Q9NZ09 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UBAP1Q9NZ09 SLC25A24-204ENST00000569674 2357 ntBASIC21.62■■□□□ 1.05
UBAP1Q9NZ09 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.62■■□□□ 1.05
UBAP1Q9NZ09 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBAP1Q9NZ09 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
UBAP1Q9NZ09 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.61■■□□□ 1.05
UBAP1Q9NZ09 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UBAP1Q9NZ09 DUX4L13-201ENST00000554103 1267 ntBASIC21.61■■□□□ 1.05
UBAP1Q9NZ09 DUX4L15-201ENST00000611059 1267 ntBASIC21.61■■□□□ 1.05
UBAP1Q9NZ09 DUX4L23-201ENST00000615195 1269 ntBASIC21.61■■□□□ 1.05
UBAP1Q9NZ09 DUX4L24-201ENST00000617576 1269 ntBASIC21.61■■□□□ 1.05
UBAP1Q9NZ09 DUX4L22-201ENST00000618238 1269 ntBASIC21.61■■□□□ 1.05
UBAP1Q9NZ09 DUX4L20-201ENST00000619712 1269 ntBASIC21.61■■□□□ 1.05
UBAP1Q9NZ09 DUX4L21-201ENST00000622058 1269 ntBASIC21.61■■□□□ 1.05
UBAP1Q9NZ09 DUX4L10-201ENST00000622460 1267 ntBASIC21.61■■□□□ 1.05
UBAP1Q9NZ09 DUX4L25-201ENST00000624915 1269 ntBASIC21.61■■□□□ 1.05
UBAP1Q9NZ09 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBAP1Q9NZ09 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
UBAP1Q9NZ09 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.61■■□□□ 1.05
UBAP1Q9NZ09 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
UBAP1Q9NZ09 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UBAP1Q9NZ09 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBAP1Q9NZ09 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.61■■□□□ 1.05
UBAP1Q9NZ09 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UBAP1Q9NZ09 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBAP1Q9NZ09 MIR639-201ENST00000384974 98 ntBASIC21.6■■□□□ 1.05
UBAP1Q9NZ09 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBAP1Q9NZ09 AC127496.7-201ENST00000625110 1798 ntBASIC21.6■■□□□ 1.05
UBAP1Q9NZ09 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
UBAP1Q9NZ09 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBAP1Q9NZ09 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBAP1Q9NZ09 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
UBAP1Q9NZ09 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.6■■□□□ 1.05
UBAP1Q9NZ09 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBAP1Q9NZ09 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBAP1Q9NZ09 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.59■■□□□ 1.05
UBAP1Q9NZ09 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.59■■□□□ 1.05
UBAP1Q9NZ09 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBAP1Q9NZ09 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
UBAP1Q9NZ09 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
UBAP1Q9NZ09 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBAP1Q9NZ09 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBAP1Q9NZ09 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBAP1Q9NZ09 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBAP1Q9NZ09 GUSBP5-202ENST00000510805 1989 ntBASIC21.58■■□□□ 1.05
UBAP1Q9NZ09 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBAP1Q9NZ09 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBAP1Q9NZ09 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBAP1Q9NZ09 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
UBAP1Q9NZ09 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
UBAP1Q9NZ09 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.58■■□□□ 1.05
UBAP1Q9NZ09 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
UBAP1Q9NZ09 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
UBAP1Q9NZ09 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
UBAP1Q9NZ09 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
UBAP1Q9NZ09 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.58■■□□□ 1.04
UBAP1Q9NZ09 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.58■■□□□ 1.04
UBAP1Q9NZ09 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
UBAP1Q9NZ09 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
UBAP1Q9NZ09 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
UBAP1Q9NZ09 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UBAP1Q9NZ09 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBAP1Q9NZ09 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBAP1Q9NZ09 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBAP1Q9NZ09 AL137060.1-201ENST00000618151 2648 ntBASIC21.57■■□□□ 1.04
UBAP1Q9NZ09 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms