Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GCM1Q9NP62 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
GCM1Q9NP62 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GCM1Q9NP62 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.65■□□□□ 0.74
GCM1Q9NP62 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GCM1Q9NP62 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GCM1Q9NP62 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GCM1Q9NP62 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
GCM1Q9NP62 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GCM1Q9NP62 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GCM1Q9NP62 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GCM1Q9NP62 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
GCM1Q9NP62 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
GCM1Q9NP62 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
GCM1Q9NP62 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
GCM1Q9NP62 KRT125P-201ENST00000546827 989 ntBASIC19.64■□□□□ 0.73
GCM1Q9NP62 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.64■□□□□ 0.73
GCM1Q9NP62 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.64■□□□□ 0.73
GCM1Q9NP62 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GCM1Q9NP62 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GCM1Q9NP62 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GCM1Q9NP62 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GCM1Q9NP62 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GCM1Q9NP62 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GCM1Q9NP62 AC021242.3-201ENST00000607598 1377 ntBASIC19.63■□□□□ 0.73
GCM1Q9NP62 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.63■□□□□ 0.73
GCM1Q9NP62 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
GCM1Q9NP62 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.63■□□□□ 0.73
GCM1Q9NP62 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.63■□□□□ 0.73
GCM1Q9NP62 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.63■□□□□ 0.73
GCM1Q9NP62 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GCM1Q9NP62 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GCM1Q9NP62 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.62■□□□□ 0.73
GCM1Q9NP62 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GCM1Q9NP62 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GCM1Q9NP62 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
GCM1Q9NP62 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.62■□□□□ 0.73
GCM1Q9NP62 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.62■□□□□ 0.73
GCM1Q9NP62 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GCM1Q9NP62 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
GCM1Q9NP62 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GCM1Q9NP62 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GCM1Q9NP62 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GCM1Q9NP62 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GCM1Q9NP62 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.61■□□□□ 0.73
GCM1Q9NP62 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.61■□□□□ 0.73
GCM1Q9NP62 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GCM1Q9NP62 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
GCM1Q9NP62 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
GCM1Q9NP62 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GCM1Q9NP62 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GCM1Q9NP62 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GCM1Q9NP62 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GCM1Q9NP62 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GCM1Q9NP62 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.6■□□□□ 0.73
GCM1Q9NP62 MIR4787-201ENST00000607364 84 ntBASIC19.6■□□□□ 0.73
GCM1Q9NP62 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GCM1Q9NP62 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GCM1Q9NP62 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
GCM1Q9NP62 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.59■□□□□ 0.73
GCM1Q9NP62 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GCM1Q9NP62 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GCM1Q9NP62 HLA-L-211ENST00000482052 1765 ntBASIC19.59■□□□□ 0.73
GCM1Q9NP62 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GCM1Q9NP62 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GCM1Q9NP62 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GCM1Q9NP62 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
GCM1Q9NP62 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
GCM1Q9NP62 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.58■□□□□ 0.73
GCM1Q9NP62 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.58■□□□□ 0.73
GCM1Q9NP62 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.58■□□□□ 0.73
GCM1Q9NP62 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GCM1Q9NP62 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
GCM1Q9NP62 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GCM1Q9NP62 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.58■□□□□ 0.72
GCM1Q9NP62 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GCM1Q9NP62 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.57■□□□□ 0.72
GCM1Q9NP62 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GCM1Q9NP62 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GCM1Q9NP62 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GCM1Q9NP62 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.57■□□□□ 0.72
GCM1Q9NP62 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.57■□□□□ 0.72
GCM1Q9NP62 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GCM1Q9NP62 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.57■□□□□ 0.72
GCM1Q9NP62 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
GCM1Q9NP62 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GCM1Q9NP62 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GCM1Q9NP62 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GCM1Q9NP62 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
GCM1Q9NP62 GUSBP5-201ENST00000418136 578 ntBASIC19.56■□□□□ 0.72
GCM1Q9NP62 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.56■□□□□ 0.72
GCM1Q9NP62 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.56■□□□□ 0.72
GCM1Q9NP62 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.56■□□□□ 0.72
GCM1Q9NP62 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.56■□□□□ 0.72
GCM1Q9NP62 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.56■□□□□ 0.72
GCM1Q9NP62 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GCM1Q9NP62 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GCM1Q9NP62 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
GCM1Q9NP62 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GCM1Q9NP62 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms