Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
ZNF304Q9HCX3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ZNF304Q9HCX3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
ZNF304Q9HCX3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ZNF304Q9HCX3 MIR6724-1-201ENST00000616420 92 ntBASIC21.89■■□□□ 1.09
ZNF304Q9HCX3 MIR6724-2-201ENST00000616483 92 ntBASIC21.89■■□□□ 1.09
ZNF304Q9HCX3 MIR6724-4-201ENST00000617390 92 ntBASIC21.89■■□□□ 1.09
ZNF304Q9HCX3 MIR6724-3-201ENST00000622482 92 ntBASIC21.89■■□□□ 1.09
ZNF304Q9HCX3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.89■■□□□ 1.09
ZNF304Q9HCX3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ZNF304Q9HCX3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.88■■□□□ 1.09
ZNF304Q9HCX3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF304Q9HCX3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.88■■□□□ 1.09
ZNF304Q9HCX3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF304Q9HCX3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.88■■□□□ 1.09
ZNF304Q9HCX3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF304Q9HCX3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
ZNF304Q9HCX3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF304Q9HCX3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
ZNF304Q9HCX3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.88■■□□□ 1.09
ZNF304Q9HCX3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.88■■□□□ 1.09
ZNF304Q9HCX3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF304Q9HCX3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
ZNF304Q9HCX3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF304Q9HCX3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
ZNF304Q9HCX3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.87■■□□□ 1.09
ZNF304Q9HCX3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.87■■□□□ 1.09
ZNF304Q9HCX3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
ZNF304Q9HCX3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
ZNF304Q9HCX3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF304Q9HCX3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ZNF304Q9HCX3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.86■■□□□ 1.09
ZNF304Q9HCX3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.86■■□□□ 1.09
ZNF304Q9HCX3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.86■■□□□ 1.09
ZNF304Q9HCX3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.86■■□□□ 1.09
ZNF304Q9HCX3 AC022211.4-201ENST00000625094 2161 ntBASIC21.86■■□□□ 1.09
ZNF304Q9HCX3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.86■■□□□ 1.09
ZNF304Q9HCX3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ZNF304Q9HCX3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
ZNF304Q9HCX3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZNF304Q9HCX3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZNF304Q9HCX3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ZNF304Q9HCX3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
ZNF304Q9HCX3 AC004448.1-201ENST00000458332 883 ntBASIC21.85■■□□□ 1.09
ZNF304Q9HCX3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.85■■□□□ 1.09
ZNF304Q9HCX3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.85■■□□□ 1.09
ZNF304Q9HCX3 MIR6722-201ENST00000617286 78 ntBASIC21.85■■□□□ 1.09
ZNF304Q9HCX3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.85■■□□□ 1.09
ZNF304Q9HCX3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZNF304Q9HCX3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ZNF304Q9HCX3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZNF304Q9HCX3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
ZNF304Q9HCX3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZNF304Q9HCX3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZNF304Q9HCX3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.84■■□□□ 1.09
ZNF304Q9HCX3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZNF304Q9HCX3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZNF304Q9HCX3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ZNF304Q9HCX3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.84■■□□□ 1.09
ZNF304Q9HCX3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.84■■□□□ 1.09
ZNF304Q9HCX3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZNF304Q9HCX3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ZNF304Q9HCX3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.83■■□□□ 1.09
ZNF304Q9HCX3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
ZNF304Q9HCX3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.83■■□□□ 1.09
ZNF304Q9HCX3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ZNF304Q9HCX3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ZNF304Q9HCX3 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.83■■□□□ 1.09
ZNF304Q9HCX3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.83■■□□□ 1.09
ZNF304Q9HCX3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.83■■□□□ 1.09
ZNF304Q9HCX3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.83■■□□□ 1.09
ZNF304Q9HCX3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
ZNF304Q9HCX3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ZNF304Q9HCX3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
ZNF304Q9HCX3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
ZNF304Q9HCX3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZNF304Q9HCX3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZNF304Q9HCX3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
ZNF304Q9HCX3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
ZNF304Q9HCX3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
ZNF304Q9HCX3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.82■■□□□ 1.08
ZNF304Q9HCX3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.82■■□□□ 1.08
ZNF304Q9HCX3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.82■■□□□ 1.08
ZNF304Q9HCX3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.82■■□□□ 1.08
ZNF304Q9HCX3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ZNF304Q9HCX3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZNF304Q9HCX3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.82■■□□□ 1.08
ZNF304Q9HCX3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZNF304Q9HCX3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZNF304Q9HCX3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF304Q9HCX3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.81■■□□□ 1.08
ZNF304Q9HCX3 AL356740.2-201ENST00000601559 647 ntBASIC21.81■■□□□ 1.08
ZNF304Q9HCX3 AL117332.1-201ENST00000622628 974 ntBASIC21.81■■□□□ 1.08
ZNF304Q9HCX3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
ZNF304Q9HCX3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF304Q9HCX3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.81■■□□□ 1.08
ZNF304Q9HCX3 AC131274.2-201ENST00000580697 1507 ntBASIC21.8■■□□□ 1.08
ZNF304Q9HCX3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZNF304Q9HCX3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZNF304Q9HCX3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms