Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH20Q9HBT6 KRT125P-201ENST00000546827 989 ntBASIC20.11■□□□□ 0.81
CDH20Q9HBT6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.11■□□□□ 0.81
CDH20Q9HBT6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.11■□□□□ 0.81
CDH20Q9HBT6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CDH20Q9HBT6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
CDH20Q9HBT6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH20Q9HBT6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH20Q9HBT6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH20Q9HBT6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.1■□□□□ 0.81
CDH20Q9HBT6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
CDH20Q9HBT6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH20Q9HBT6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH20Q9HBT6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH20Q9HBT6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH20Q9HBT6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH20Q9HBT6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH20Q9HBT6 AC137630.3-201ENST00000607245 391 ntBASIC20.1■□□□□ 0.81
CDH20Q9HBT6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH20Q9HBT6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH20Q9HBT6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH20Q9HBT6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH20Q9HBT6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH20Q9HBT6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH20Q9HBT6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH20Q9HBT6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH20Q9HBT6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH20Q9HBT6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.08■□□□□ 0.81
CDH20Q9HBT6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.08■□□□□ 0.81
CDH20Q9HBT6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CDH20Q9HBT6 HLA-L-211ENST00000482052 1765 ntBASIC20.08■□□□□ 0.81
CDH20Q9HBT6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDH20Q9HBT6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDH20Q9HBT6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CDH20Q9HBT6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.08■□□□□ 0.81
CDH20Q9HBT6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.08■□□□□ 0.81
CDH20Q9HBT6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CDH20Q9HBT6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.08■□□□□ 0.81
CDH20Q9HBT6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.08■□□□□ 0.81
CDH20Q9HBT6 Z92544.1-202ENST00000571933 1220 ntBASIC20.08■□□□□ 0.81
CDH20Q9HBT6 AL035685.1-201ENST00000636663 812 ntBASIC20.08■□□□□ 0.81
CDH20Q9HBT6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDH20Q9HBT6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH20Q9HBT6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH20Q9HBT6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH20Q9HBT6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH20Q9HBT6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH20Q9HBT6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.07■□□□□ 0.8
CDH20Q9HBT6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH20Q9HBT6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.07■□□□□ 0.8
CDH20Q9HBT6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CDH20Q9HBT6 AC239859.2-201ENST00000444165 318 ntBASIC20.06■□□□□ 0.8
CDH20Q9HBT6 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.06■□□□□ 0.8
CDH20Q9HBT6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.06■□□□□ 0.8
CDH20Q9HBT6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.06■□□□□ 0.8
CDH20Q9HBT6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH20Q9HBT6 AF131216.4-201ENST00000638924 1588 ntBASIC20.06■□□□□ 0.8
CDH20Q9HBT6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CDH20Q9HBT6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDH20Q9HBT6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDH20Q9HBT6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.05■□□□□ 0.8
CDH20Q9HBT6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH20Q9HBT6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH20Q9HBT6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH20Q9HBT6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH20Q9HBT6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CDH20Q9HBT6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH20Q9HBT6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CDH20Q9HBT6 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH20Q9HBT6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.05■□□□□ 0.8
CDH20Q9HBT6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH20Q9HBT6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH20Q9HBT6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH20Q9HBT6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH20Q9HBT6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH20Q9HBT6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CDH20Q9HBT6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH20Q9HBT6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDH20Q9HBT6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDH20Q9HBT6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.04■□□□□ 0.8
CDH20Q9HBT6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.04■□□□□ 0.8
CDH20Q9HBT6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH20Q9HBT6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH20Q9HBT6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH20Q9HBT6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.03■□□□□ 0.8
CDH20Q9HBT6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH20Q9HBT6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH20Q9HBT6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.03■□□□□ 0.8
CDH20Q9HBT6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.03■□□□□ 0.8
CDH20Q9HBT6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH20Q9HBT6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CDH20Q9HBT6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH20Q9HBT6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH20Q9HBT6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH20Q9HBT6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH20Q9HBT6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH20Q9HBT6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.02■□□□□ 0.8
CDH20Q9HBT6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.02■□□□□ 0.8
CDH20Q9HBT6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.02■□□□□ 0.8
CDH20Q9HBT6 MIR4787-201ENST00000607364 84 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms