Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PIF1Q9H611 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.94■■□□□ 1.1
PIF1Q9H611 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.94■■□□□ 1.1
PIF1Q9H611 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.94■■□□□ 1.1
PIF1Q9H611 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
PIF1Q9H611 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PIF1Q9H611 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PIF1Q9H611 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.94■■□□□ 1.1
PIF1Q9H611 FOXO3B-201ENST00000395675 1928 ntBASIC21.94■■□□□ 1.1
PIF1Q9H611 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PIF1Q9H611 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PIF1Q9H611 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PIF1Q9H611 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.93■■□□□ 1.1
PIF1Q9H611 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.93■■□□□ 1.1
PIF1Q9H611 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PIF1Q9H611 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.93■■□□□ 1.1
PIF1Q9H611 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.93■■□□□ 1.1
PIF1Q9H611 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PIF1Q9H611 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.92■■□□□ 1.1
PIF1Q9H611 ECEL1P2-201ENST00000461596 1295 ntBASIC21.92■■□□□ 1.1
PIF1Q9H611 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.92■■□□□ 1.1
PIF1Q9H611 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PIF1Q9H611 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PIF1Q9H611 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PIF1Q9H611 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PIF1Q9H611 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.92■■□□□ 1.1
PIF1Q9H611 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PIF1Q9H611 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
PIF1Q9H611 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.91■■□□□ 1.1
PIF1Q9H611 GPX1-201ENST00000419349 1106 ntBASIC21.91■■□□□ 1.1
PIF1Q9H611 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.91■■□□□ 1.1
PIF1Q9H611 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.91■■□□□ 1.1
PIF1Q9H611 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PIF1Q9H611 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
PIF1Q9H611 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PIF1Q9H611 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.9■■□□□ 1.1
PIF1Q9H611 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.9■■□□□ 1.1
PIF1Q9H611 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.9■■□□□ 1.1
PIF1Q9H611 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.9■■□□□ 1.1
PIF1Q9H611 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PIF1Q9H611 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PIF1Q9H611 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
PIF1Q9H611 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.9■■□□□ 1.1
PIF1Q9H611 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PIF1Q9H611 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PIF1Q9H611 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PIF1Q9H611 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.89■■□□□ 1.1
PIF1Q9H611 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
PIF1Q9H611 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PIF1Q9H611 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
PIF1Q9H611 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.09
PIF1Q9H611 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.89■■□□□ 1.09
PIF1Q9H611 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PIF1Q9H611 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PIF1Q9H611 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PIF1Q9H611 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PIF1Q9H611 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PIF1Q9H611 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PIF1Q9H611 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PIF1Q9H611 AC079834.2-201ENST00000609776 1949 ntBASIC21.88■■□□□ 1.09
PIF1Q9H611 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.88■■□□□ 1.09
PIF1Q9H611 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PIF1Q9H611 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PIF1Q9H611 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PIF1Q9H611 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PIF1Q9H611 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PIF1Q9H611 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PIF1Q9H611 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.87■■□□□ 1.09
PIF1Q9H611 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PIF1Q9H611 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.87■■□□□ 1.09
PIF1Q9H611 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.87■■□□□ 1.09
PIF1Q9H611 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PIF1Q9H611 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PIF1Q9H611 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.87■■□□□ 1.09
PIF1Q9H611 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.87■■□□□ 1.09
PIF1Q9H611 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PIF1Q9H611 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PIF1Q9H611 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PIF1Q9H611 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PIF1Q9H611 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.86■■□□□ 1.09
PIF1Q9H611 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PIF1Q9H611 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PIF1Q9H611 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PIF1Q9H611 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PIF1Q9H611 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PIF1Q9H611 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.85■■□□□ 1.09
PIF1Q9H611 RNF126P1-201ENST00000567452 1320 ntBASIC21.85■■□□□ 1.09
PIF1Q9H611 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PIF1Q9H611 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.85■■□□□ 1.09
PIF1Q9H611 AC007029.1-201ENST00000604183 313 ntBASIC21.85■■□□□ 1.09
PIF1Q9H611 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PIF1Q9H611 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PIF1Q9H611 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PIF1Q9H611 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
PIF1Q9H611 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PIF1Q9H611 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PIF1Q9H611 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
PIF1Q9H611 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
PIF1Q9H611 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PIF1Q9H611 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms