Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 AC137767.1-201ENST00000602918 1920 ntBASIC25.35■■□□□ 1.65
KCNF1Q9H3M0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
KCNF1Q9H3M0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.35■■□□□ 1.65
KCNF1Q9H3M0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.35■■□□□ 1.65
KCNF1Q9H3M0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
KCNF1Q9H3M0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
KCNF1Q9H3M0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.34■■□□□ 1.65
KCNF1Q9H3M0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
KCNF1Q9H3M0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.34■■□□□ 1.65
KCNF1Q9H3M0 HLA-V-202ENST00000446817 847 ntBASIC25.34■■□□□ 1.65
KCNF1Q9H3M0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.34■■□□□ 1.65
KCNF1Q9H3M0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
KCNF1Q9H3M0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
KCNF1Q9H3M0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
KCNF1Q9H3M0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
KCNF1Q9H3M0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.33■■□□□ 1.65
KCNF1Q9H3M0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
KCNF1Q9H3M0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
KCNF1Q9H3M0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.33■■□□□ 1.65
KCNF1Q9H3M0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.33■■□□□ 1.65
KCNF1Q9H3M0 AC044849.2-201ENST00000606596 710 ntBASIC25.33■■□□□ 1.65
KCNF1Q9H3M0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
KCNF1Q9H3M0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
KCNF1Q9H3M0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
KCNF1Q9H3M0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
KCNF1Q9H3M0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
KCNF1Q9H3M0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
KCNF1Q9H3M0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
KCNF1Q9H3M0 DUX4L29-201ENST00000425409 679 ntBASIC25.32■■□□□ 1.64
KCNF1Q9H3M0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
KCNF1Q9H3M0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
KCNF1Q9H3M0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
KCNF1Q9H3M0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
KCNF1Q9H3M0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
KCNF1Q9H3M0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
KCNF1Q9H3M0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.31■■□□□ 1.64
KCNF1Q9H3M0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.31■■□□□ 1.64
KCNF1Q9H3M0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.31■■□□□ 1.64
KCNF1Q9H3M0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
KCNF1Q9H3M0 ECEL1P1-201ENST00000373592 1742 ntBASIC25.31■■□□□ 1.64
KCNF1Q9H3M0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
KCNF1Q9H3M0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
KCNF1Q9H3M0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
KCNF1Q9H3M0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
KCNF1Q9H3M0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.3■■□□□ 1.64
KCNF1Q9H3M0 AC127496.7-201ENST00000625110 1798 ntBASIC25.3■■□□□ 1.64
KCNF1Q9H3M0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.3■■□□□ 1.64
KCNF1Q9H3M0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
KCNF1Q9H3M0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
KCNF1Q9H3M0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
KCNF1Q9H3M0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
KCNF1Q9H3M0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
KCNF1Q9H3M0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
KCNF1Q9H3M0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC25.29■■□□□ 1.64
KCNF1Q9H3M0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
KCNF1Q9H3M0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
KCNF1Q9H3M0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
KCNF1Q9H3M0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
KCNF1Q9H3M0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC25.28■■□□□ 1.64
KCNF1Q9H3M0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
KCNF1Q9H3M0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
KCNF1Q9H3M0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC25.27■■□□□ 1.64
KCNF1Q9H3M0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
KCNF1Q9H3M0 AC092068.2-201ENST00000590491 1708 ntBASIC25.27■■□□□ 1.64
KCNF1Q9H3M0 AL162393.1-201ENST00000437852 946 ntBASIC25.27■■□□□ 1.64
KCNF1Q9H3M0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
KCNF1Q9H3M0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
KCNF1Q9H3M0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC25.27■■□□□ 1.64
KCNF1Q9H3M0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
KCNF1Q9H3M0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
KCNF1Q9H3M0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
KCNF1Q9H3M0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
KCNF1Q9H3M0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
KCNF1Q9H3M0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
KCNF1Q9H3M0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
KCNF1Q9H3M0 DUX4L13-201ENST00000554103 1267 ntBASIC25.26■■□□□ 1.63
KCNF1Q9H3M0 DUX4L15-201ENST00000611059 1267 ntBASIC25.26■■□□□ 1.63
KCNF1Q9H3M0 DUX4L23-201ENST00000615195 1269 ntBASIC25.26■■□□□ 1.63
KCNF1Q9H3M0 DUX4L24-201ENST00000617576 1269 ntBASIC25.26■■□□□ 1.63
KCNF1Q9H3M0 DUX4L22-201ENST00000618238 1269 ntBASIC25.26■■□□□ 1.63
KCNF1Q9H3M0 DUX4L20-201ENST00000619712 1269 ntBASIC25.26■■□□□ 1.63
KCNF1Q9H3M0 DUX4L21-201ENST00000622058 1269 ntBASIC25.26■■□□□ 1.63
KCNF1Q9H3M0 DUX4L10-201ENST00000622460 1267 ntBASIC25.26■■□□□ 1.63
KCNF1Q9H3M0 DUX4L25-201ENST00000624915 1269 ntBASIC25.26■■□□□ 1.63
KCNF1Q9H3M0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
KCNF1Q9H3M0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC25.26■■□□□ 1.63
KCNF1Q9H3M0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
KCNF1Q9H3M0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
KCNF1Q9H3M0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
KCNF1Q9H3M0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
KCNF1Q9H3M0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
KCNF1Q9H3M0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.25■■□□□ 1.63
KCNF1Q9H3M0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
KCNF1Q9H3M0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
KCNF1Q9H3M0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
KCNF1Q9H3M0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
KCNF1Q9H3M0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.24■■□□□ 1.63
KCNF1Q9H3M0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.24■■□□□ 1.63
KCNF1Q9H3M0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
KCNF1Q9H3M0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms