Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 TSPY9P-201ENST00000440215 945 ntBASIC27.25■■□□□ 1.95
ZKSCAN3Q9BRR0 TSPY11P-201ENST00000442607 1045 ntBASIC27.25■■□□□ 1.95
ZKSCAN3Q9BRR0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC27.25■■□□□ 1.95
ZKSCAN3Q9BRR0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ZKSCAN3Q9BRR0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ZKSCAN3Q9BRR0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC27.24■■□□□ 1.95
ZKSCAN3Q9BRR0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
ZKSCAN3Q9BRR0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC27.24■■□□□ 1.95
ZKSCAN3Q9BRR0 AC092028.1-203ENST00000608262 953 ntBASIC27.24■■□□□ 1.95
ZKSCAN3Q9BRR0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZKSCAN3Q9BRR0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC27.23■■□□□ 1.95
ZKSCAN3Q9BRR0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZKSCAN3Q9BRR0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ZKSCAN3Q9BRR0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZKSCAN3Q9BRR0 UNC93B8-201ENST00000511903 705 ntBASIC27.23■■□□□ 1.95
ZKSCAN3Q9BRR0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ZKSCAN3Q9BRR0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC27.22■■□□□ 1.95
ZKSCAN3Q9BRR0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
ZKSCAN3Q9BRR0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC27.22■■□□□ 1.95
ZKSCAN3Q9BRR0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
ZKSCAN3Q9BRR0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ZKSCAN3Q9BRR0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
ZKSCAN3Q9BRR0 AC131274.2-201ENST00000580697 1507 ntBASIC27.21■■□□□ 1.95
ZKSCAN3Q9BRR0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
ZKSCAN3Q9BRR0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC27.21■■□□□ 1.95
ZKSCAN3Q9BRR0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
ZKSCAN3Q9BRR0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ZKSCAN3Q9BRR0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
ZKSCAN3Q9BRR0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
ZKSCAN3Q9BRR0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC27.21■■□□□ 1.95
ZKSCAN3Q9BRR0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
ZKSCAN3Q9BRR0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ZKSCAN3Q9BRR0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
ZKSCAN3Q9BRR0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.94
ZKSCAN3Q9BRR0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC27.2■■□□□ 1.94
ZKSCAN3Q9BRR0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC27.2■■□□□ 1.94
ZKSCAN3Q9BRR0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.94
ZKSCAN3Q9BRR0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
ZKSCAN3Q9BRR0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
ZKSCAN3Q9BRR0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC27.19■■□□□ 1.94
ZKSCAN3Q9BRR0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC27.19■■□□□ 1.94
ZKSCAN3Q9BRR0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
ZKSCAN3Q9BRR0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.19■■□□□ 1.94
ZKSCAN3Q9BRR0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC27.18■■□□□ 1.94
ZKSCAN3Q9BRR0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC27.18■■□□□ 1.94
ZKSCAN3Q9BRR0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ZKSCAN3Q9BRR0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
ZKSCAN3Q9BRR0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC27.18■■□□□ 1.94
ZKSCAN3Q9BRR0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC27.18■■□□□ 1.94
ZKSCAN3Q9BRR0 AL139125.2-201ENST00000623134 1869 ntBASIC27.18■■□□□ 1.94
ZKSCAN3Q9BRR0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
ZKSCAN3Q9BRR0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ZKSCAN3Q9BRR0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ZKSCAN3Q9BRR0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
ZKSCAN3Q9BRR0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
ZKSCAN3Q9BRR0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
ZKSCAN3Q9BRR0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
ZKSCAN3Q9BRR0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
ZKSCAN3Q9BRR0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.17■■□□□ 1.94
ZKSCAN3Q9BRR0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC27.17■■□□□ 1.94
ZKSCAN3Q9BRR0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC27.17■■□□□ 1.94
ZKSCAN3Q9BRR0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
ZKSCAN3Q9BRR0 SNX5-217ENST00000606557 1087 ntBASIC27.17■■□□□ 1.94
ZKSCAN3Q9BRR0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
ZKSCAN3Q9BRR0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
ZKSCAN3Q9BRR0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
ZKSCAN3Q9BRR0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC27.17■■□□□ 1.94
ZKSCAN3Q9BRR0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC27.16■■□□□ 1.94
ZKSCAN3Q9BRR0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
ZKSCAN3Q9BRR0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
ZKSCAN3Q9BRR0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC27.16■■□□□ 1.94
ZKSCAN3Q9BRR0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC27.16■■□□□ 1.94
ZKSCAN3Q9BRR0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
ZKSCAN3Q9BRR0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC27.15■■□□□ 1.94
ZKSCAN3Q9BRR0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC27.15■■□□□ 1.94
ZKSCAN3Q9BRR0 LINC01124-201ENST00000409786 2117 ntBASIC27.15■■□□□ 1.94
ZKSCAN3Q9BRR0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.15■■□□□ 1.94
ZKSCAN3Q9BRR0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
ZKSCAN3Q9BRR0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
ZKSCAN3Q9BRR0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
ZKSCAN3Q9BRR0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
ZKSCAN3Q9BRR0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
ZKSCAN3Q9BRR0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
ZKSCAN3Q9BRR0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
ZKSCAN3Q9BRR0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
ZKSCAN3Q9BRR0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC27.14■■□□□ 1.94
ZKSCAN3Q9BRR0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC27.14■■□□□ 1.94
ZKSCAN3Q9BRR0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
ZKSCAN3Q9BRR0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
ZKSCAN3Q9BRR0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC27.13■■□□□ 1.93
ZKSCAN3Q9BRR0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
ZKSCAN3Q9BRR0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC27.13■■□□□ 1.93
ZKSCAN3Q9BRR0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC27.13■■□□□ 1.93
ZKSCAN3Q9BRR0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
ZKSCAN3Q9BRR0 EED-207ENST00000528180 1745 ntTSL 5 BASIC27.13■■□□□ 1.93
ZKSCAN3Q9BRR0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ZKSCAN3Q9BRR0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC27.13■■□□□ 1.93
ZKSCAN3Q9BRR0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC27.13■■□□□ 1.93
ZKSCAN3Q9BRR0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
ZKSCAN3Q9BRR0 AL356441.2-201ENST00000443009 864 ntBASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms