Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 AC020928.2-201ENST00000588717 2197 ntBASIC30.57■■■□□ 2.48
PHACTR3Q96KR7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
PHACTR3Q96KR7 AC004448.1-201ENST00000458332 883 ntBASIC30.57■■■□□ 2.48
PHACTR3Q96KR7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
PHACTR3Q96KR7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
PHACTR3Q96KR7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PHACTR3Q96KR7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PHACTR3Q96KR7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC30.56■■■□□ 2.48
PHACTR3Q96KR7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC30.56■■■□□ 2.48
PHACTR3Q96KR7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
PHACTR3Q96KR7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PHACTR3Q96KR7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PHACTR3Q96KR7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PHACTR3Q96KR7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC30.56■■■□□ 2.48
PHACTR3Q96KR7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.56■■■□□ 2.48
PHACTR3Q96KR7 MIR3621-201ENST00000580529 85 ntBASIC30.56■■■□□ 2.48
PHACTR3Q96KR7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
PHACTR3Q96KR7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC30.56■■■□□ 2.48
PHACTR3Q96KR7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC30.56■■■□□ 2.48
PHACTR3Q96KR7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC30.56■■■□□ 2.48
PHACTR3Q96KR7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PHACTR3Q96KR7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
PHACTR3Q96KR7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
PHACTR3Q96KR7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC30.55■■■□□ 2.48
PHACTR3Q96KR7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
PHACTR3Q96KR7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC30.55■■■□□ 2.48
PHACTR3Q96KR7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC30.55■■■□□ 2.48
PHACTR3Q96KR7 MIR6722-201ENST00000617286 78 ntBASIC30.55■■■□□ 2.48
PHACTR3Q96KR7 HLA-L-211ENST00000482052 1765 ntBASIC30.55■■■□□ 2.48
PHACTR3Q96KR7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PHACTR3Q96KR7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PHACTR3Q96KR7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC30.54■■■□□ 2.48
PHACTR3Q96KR7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PHACTR3Q96KR7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
PHACTR3Q96KR7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
PHACTR3Q96KR7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC30.53■■■□□ 2.48
PHACTR3Q96KR7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC30.53■■■□□ 2.48
PHACTR3Q96KR7 AC131281.2-201ENST00000520478 145 ntBASIC30.53■■■□□ 2.48
PHACTR3Q96KR7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC30.53■■■□□ 2.48
PHACTR3Q96KR7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC30.53■■■□□ 2.48
PHACTR3Q96KR7 RASSF1-AS1-201ENST00000629828 790 ntBASIC30.53■■■□□ 2.48
PHACTR3Q96KR7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
PHACTR3Q96KR7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC30.53■■■□□ 2.48
PHACTR3Q96KR7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
PHACTR3Q96KR7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
PHACTR3Q96KR7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
PHACTR3Q96KR7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC30.52■■■□□ 2.48
PHACTR3Q96KR7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PHACTR3Q96KR7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PHACTR3Q96KR7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC30.52■■■□□ 2.48
PHACTR3Q96KR7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC30.52■■■□□ 2.48
PHACTR3Q96KR7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC30.52■■■□□ 2.48
PHACTR3Q96KR7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC30.51■■■□□ 2.47
PHACTR3Q96KR7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
PHACTR3Q96KR7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC30.51■■■□□ 2.47
PHACTR3Q96KR7 SRR-208ENST00000576848 588 ntTSL 4 BASIC30.51■■■□□ 2.47
PHACTR3Q96KR7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
PHACTR3Q96KR7 AC138932.3-201ENST00000567634 1902 ntBASIC30.51■■■□□ 2.47
PHACTR3Q96KR7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
PHACTR3Q96KR7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC30.51■■■□□ 2.47
PHACTR3Q96KR7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PHACTR3Q96KR7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
PHACTR3Q96KR7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC30.5■■■□□ 2.47
PHACTR3Q96KR7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC30.5■■■□□ 2.47
PHACTR3Q96KR7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
PHACTR3Q96KR7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PHACTR3Q96KR7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
PHACTR3Q96KR7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
PHACTR3Q96KR7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC30.49■■■□□ 2.47
PHACTR3Q96KR7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC30.49■■■□□ 2.47
PHACTR3Q96KR7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
PHACTR3Q96KR7 AC008406.3-201ENST00000620001 1374 ntBASIC30.49■■■□□ 2.47
PHACTR3Q96KR7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PHACTR3Q96KR7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PHACTR3Q96KR7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
PHACTR3Q96KR7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PHACTR3Q96KR7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC30.48■■■□□ 2.47
PHACTR3Q96KR7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PHACTR3Q96KR7 AC135731.1-201ENST00000569415 2548 ntBASIC30.48■■■□□ 2.47
PHACTR3Q96KR7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC30.47■■■□□ 2.47
PHACTR3Q96KR7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
PHACTR3Q96KR7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC30.47■■■□□ 2.47
PHACTR3Q96KR7 MIR4466-201ENST00000606121 54 ntBASIC30.47■■■□□ 2.47
PHACTR3Q96KR7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PHACTR3Q96KR7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
PHACTR3Q96KR7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
PHACTR3Q96KR7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
PHACTR3Q96KR7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
PHACTR3Q96KR7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
PHACTR3Q96KR7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC30.46■■■□□ 2.47
PHACTR3Q96KR7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC30.46■■■□□ 2.47
PHACTR3Q96KR7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC30.46■■■□□ 2.47
PHACTR3Q96KR7 AL512631.2-201ENST00000604634 923 ntBASIC30.46■■■□□ 2.47
PHACTR3Q96KR7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
PHACTR3Q96KR7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
PHACTR3Q96KR7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC30.45■■■□□ 2.47
PHACTR3Q96KR7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC30.45■■■□□ 2.47
PHACTR3Q96KR7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC30.45■■■□□ 2.47
PHACTR3Q96KR7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
PHACTR3Q96KR7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC30.44■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms