Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.4■■□□□ 1.82
USP6NLQ92738 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
USP6NLQ92738 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
USP6NLQ92738 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
USP6NLQ92738 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
USP6NLQ92738 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
USP6NLQ92738 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
USP6NLQ92738 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
USP6NLQ92738 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
USP6NLQ92738 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
USP6NLQ92738 CA15P2-201ENST00000611168 834 ntBASIC26.39■■□□□ 1.82
USP6NLQ92738 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
USP6NLQ92738 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.39■■□□□ 1.81
USP6NLQ92738 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
USP6NLQ92738 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
USP6NLQ92738 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
USP6NLQ92738 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.38■■□□□ 1.81
USP6NLQ92738 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
USP6NLQ92738 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
USP6NLQ92738 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
USP6NLQ92738 SERBP1P1-201ENST00000396021 1160 ntBASIC26.38■■□□□ 1.81
USP6NLQ92738 AC087623.3-201ENST00000607047 1098 ntBASIC26.38■■□□□ 1.81
USP6NLQ92738 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
USP6NLQ92738 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
USP6NLQ92738 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.38■■□□□ 1.81
USP6NLQ92738 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.37■■□□□ 1.81
USP6NLQ92738 RASA4CP-201ENST00000424092 1398 ntBASIC26.37■■□□□ 1.81
USP6NLQ92738 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP6NLQ92738 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP6NLQ92738 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.37■■□□□ 1.81
USP6NLQ92738 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.37■■□□□ 1.81
USP6NLQ92738 AC092171.4-201ENST00000609130 632 ntBASIC26.37■■□□□ 1.81
USP6NLQ92738 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP6NLQ92738 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP6NLQ92738 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP6NLQ92738 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP6NLQ92738 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP6NLQ92738 PARL-206ENST00000435888 1098 ntTSL 5 BASIC26.36■■□□□ 1.81
USP6NLQ92738 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
USP6NLQ92738 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP6NLQ92738 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.36■■□□□ 1.81
USP6NLQ92738 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
USP6NLQ92738 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
USP6NLQ92738 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP6NLQ92738 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP6NLQ92738 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
USP6NLQ92738 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC26.35■■□□□ 1.81
USP6NLQ92738 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP6NLQ92738 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.34■■□□□ 1.81
USP6NLQ92738 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.34■■□□□ 1.81
USP6NLQ92738 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
USP6NLQ92738 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
USP6NLQ92738 PLD4-205ENST00000553861 667 ntTSL 2 BASIC26.34■■□□□ 1.81
USP6NLQ92738 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
USP6NLQ92738 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
USP6NLQ92738 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
USP6NLQ92738 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
USP6NLQ92738 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
USP6NLQ92738 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
USP6NLQ92738 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC26.33■■□□□ 1.81
USP6NLQ92738 AL162430.1-201ENST00000480705 870 ntBASIC26.33■■□□□ 1.81
USP6NLQ92738 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.33■■□□□ 1.81
USP6NLQ92738 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.33■■□□□ 1.81
USP6NLQ92738 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
USP6NLQ92738 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
USP6NLQ92738 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
USP6NLQ92738 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
USP6NLQ92738 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
USP6NLQ92738 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.32■■□□□ 1.8
USP6NLQ92738 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
USP6NLQ92738 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.32■■□□□ 1.8
USP6NLQ92738 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
USP6NLQ92738 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
USP6NLQ92738 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
USP6NLQ92738 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP6NLQ92738 AC131274.2-201ENST00000580697 1507 ntBASIC26.31■■□□□ 1.8
USP6NLQ92738 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP6NLQ92738 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
USP6NLQ92738 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
USP6NLQ92738 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP6NLQ92738 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP6NLQ92738 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.31■■□□□ 1.8
USP6NLQ92738 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP6NLQ92738 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
USP6NLQ92738 AC027682.1-201ENST00000562846 899 ntBASIC26.3■■□□□ 1.8
USP6NLQ92738 AC099791.2-201ENST00000605725 427 ntBASIC26.3■■□□□ 1.8
USP6NLQ92738 AL138724.1-201ENST00000606771 1088 ntBASIC26.3■■□□□ 1.8
USP6NLQ92738 AC011298.3-201ENST00000615796 283 ntBASIC26.3■■□□□ 1.8
USP6NLQ92738 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP6NLQ92738 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP6NLQ92738 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.29■■□□□ 1.8
USP6NLQ92738 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP6NLQ92738 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.29■■□□□ 1.8
USP6NLQ92738 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.29■■□□□ 1.8
USP6NLQ92738 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26.29■■□□□ 1.8
USP6NLQ92738 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.28■■□□□ 1.8
USP6NLQ92738 AC010501.1-201ENST00000606270 1962 ntBASIC26.28■■□□□ 1.8
USP6NLQ92738 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.28■■□□□ 1.8
USP6NLQ92738 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.28■■□□□ 1.8
USP6NLQ92738 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms