Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
RAPGEF4Q8WZA2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
RAPGEF4Q8WZA2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
RAPGEF4Q8WZA2 AC092803.2-201ENST00000564287 1899 ntBASIC30.62■■■□□ 2.49
RAPGEF4Q8WZA2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
RAPGEF4Q8WZA2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RAPGEF4Q8WZA2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
RAPGEF4Q8WZA2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RAPGEF4Q8WZA2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
RAPGEF4Q8WZA2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
RAPGEF4Q8WZA2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
RAPGEF4Q8WZA2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
RAPGEF4Q8WZA2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
RAPGEF4Q8WZA2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
RAPGEF4Q8WZA2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
RAPGEF4Q8WZA2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC30.61■■■□□ 2.49
RAPGEF4Q8WZA2 REST-206ENST00000612429 1376 ntTSL 5 BASIC30.61■■■□□ 2.49
RAPGEF4Q8WZA2 REST-207ENST00000616975 1370 ntTSL 5 BASIC30.61■■■□□ 2.49
RAPGEF4Q8WZA2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC30.61■■■□□ 2.49
RAPGEF4Q8WZA2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.6■■■□□ 2.49
RAPGEF4Q8WZA2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
RAPGEF4Q8WZA2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
RAPGEF4Q8WZA2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RAPGEF4Q8WZA2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RAPGEF4Q8WZA2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
RAPGEF4Q8WZA2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
RAPGEF4Q8WZA2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC30.59■■■□□ 2.49
RAPGEF4Q8WZA2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC30.59■■■□□ 2.49
RAPGEF4Q8WZA2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
RAPGEF4Q8WZA2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
RAPGEF4Q8WZA2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
RAPGEF4Q8WZA2 AC026271.2-201ENST00000428091 497 ntBASIC30.59■■■□□ 2.49
RAPGEF4Q8WZA2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC30.59■■■□□ 2.49
RAPGEF4Q8WZA2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC30.59■■■□□ 2.49
RAPGEF4Q8WZA2 GRAMD4P4-201ENST00000613563 1115 ntBASIC30.59■■■□□ 2.49
RAPGEF4Q8WZA2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC30.59■■■□□ 2.49
RAPGEF4Q8WZA2 AL136967.2-201ENST00000623968 743 ntBASIC30.59■■■□□ 2.49
RAPGEF4Q8WZA2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC30.58■■■□□ 2.49
RAPGEF4Q8WZA2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
RAPGEF4Q8WZA2 AF213884.3-201ENST00000563833 479 ntBASIC30.58■■■□□ 2.49
RAPGEF4Q8WZA2 SF1-220ENST00000626028 704 ntTSL 2 BASIC30.58■■■□□ 2.49
RAPGEF4Q8WZA2 AC131274.2-201ENST00000580697 1507 ntBASIC30.57■■■□□ 2.49
RAPGEF4Q8WZA2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
RAPGEF4Q8WZA2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
RAPGEF4Q8WZA2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RAPGEF4Q8WZA2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
RAPGEF4Q8WZA2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC30.57■■■□□ 2.48
RAPGEF4Q8WZA2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC30.57■■■□□ 2.48
RAPGEF4Q8WZA2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC30.57■■■□□ 2.48
RAPGEF4Q8WZA2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RAPGEF4Q8WZA2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
RAPGEF4Q8WZA2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
RAPGEF4Q8WZA2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
RAPGEF4Q8WZA2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC30.56■■■□□ 2.48
RAPGEF4Q8WZA2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
RAPGEF4Q8WZA2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RAPGEF4Q8WZA2 AC105265.2-201ENST00000467189 838 ntBASIC30.56■■■□□ 2.48
RAPGEF4Q8WZA2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RAPGEF4Q8WZA2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RAPGEF4Q8WZA2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC30.56■■■□□ 2.48
RAPGEF4Q8WZA2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
RAPGEF4Q8WZA2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
RAPGEF4Q8WZA2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
RAPGEF4Q8WZA2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC30.55■■■□□ 2.48
RAPGEF4Q8WZA2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC30.55■■■□□ 2.48
RAPGEF4Q8WZA2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
RAPGEF4Q8WZA2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
RAPGEF4Q8WZA2 SYT6-210ENST00000641643 1587 ntBASIC30.54■■■□□ 2.48
RAPGEF4Q8WZA2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
RAPGEF4Q8WZA2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RAPGEF4Q8WZA2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
RAPGEF4Q8WZA2 MIR939-201ENST00000401314 82 ntBASIC30.54■■■□□ 2.48
RAPGEF4Q8WZA2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
RAPGEF4Q8WZA2 AC092171.4-201ENST00000609130 632 ntBASIC30.54■■■□□ 2.48
RAPGEF4Q8WZA2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RAPGEF4Q8WZA2 AP001330.3-201ENST00000520123 633 ntBASIC30.53■■■□□ 2.48
RAPGEF4Q8WZA2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
RAPGEF4Q8WZA2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC30.52■■■□□ 2.48
RAPGEF4Q8WZA2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RAPGEF4Q8WZA2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC30.52■■■□□ 2.48
RAPGEF4Q8WZA2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
RAPGEF4Q8WZA2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC30.52■■■□□ 2.48
RAPGEF4Q8WZA2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RAPGEF4Q8WZA2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
RAPGEF4Q8WZA2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
RAPGEF4Q8WZA2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.48
RAPGEF4Q8WZA2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
RAPGEF4Q8WZA2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC30.51■■■□□ 2.47
RAPGEF4Q8WZA2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC30.51■■■□□ 2.47
RAPGEF4Q8WZA2 AC092666.2-201ENST00000613287 246 ntBASIC30.51■■■□□ 2.47
RAPGEF4Q8WZA2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
RAPGEF4Q8WZA2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RAPGEF4Q8WZA2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC30.5■■■□□ 2.47
RAPGEF4Q8WZA2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RAPGEF4Q8WZA2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC30.5■■■□□ 2.47
RAPGEF4Q8WZA2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RAPGEF4Q8WZA2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
RAPGEF4Q8WZA2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
RAPGEF4Q8WZA2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC30.49■■■□□ 2.47
RAPGEF4Q8WZA2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms