Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
CASKIN1Q8WXD9 AC106739.1-201ENST00000617035 715 ntBASIC36.44■■■■□ 3.42
CASKIN1Q8WXD9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
CASKIN1Q8WXD9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC36.43■■■■□ 3.42
CASKIN1Q8WXD9 AL031432.3-201ENST00000607698 485 ntBASIC36.43■■■■□ 3.42
CASKIN1Q8WXD9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC36.43■■■■□ 3.42
CASKIN1Q8WXD9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC36.43■■■■□ 3.42
CASKIN1Q8WXD9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
CASKIN1Q8WXD9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
CASKIN1Q8WXD9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC36.42■■■■□ 3.42
CASKIN1Q8WXD9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC36.42■■■■□ 3.42
CASKIN1Q8WXD9 AC005837.3-201ENST00000612163 286 ntBASIC36.42■■■■□ 3.42
CASKIN1Q8WXD9 AC145676.1-201ENST00000514988 2004 ntBASIC36.42■■■■□ 3.42
CASKIN1Q8WXD9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC36.42■■■■□ 3.42
CASKIN1Q8WXD9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC36.41■■■■□ 3.42
CASKIN1Q8WXD9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC36.41■■■■□ 3.42
CASKIN1Q8WXD9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
CASKIN1Q8WXD9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
CASKIN1Q8WXD9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC36.41■■■■□ 3.42
CASKIN1Q8WXD9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC36.4■■■■□ 3.42
CASKIN1Q8WXD9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC36.4■■■■□ 3.42
CASKIN1Q8WXD9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC36.4■■■■□ 3.42
CASKIN1Q8WXD9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC36.39■■■■□ 3.42
CASKIN1Q8WXD9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC36.39■■■■□ 3.42
CASKIN1Q8WXD9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC36.39■■■■□ 3.42
CASKIN1Q8WXD9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC36.39■■■■□ 3.42
CASKIN1Q8WXD9 AC005703.6-201ENST00000623265 1329 ntBASIC36.38■■■■□ 3.42
CASKIN1Q8WXD9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC36.38■■■■□ 3.41
CASKIN1Q8WXD9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
CASKIN1Q8WXD9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC36.38■■■■□ 3.41
CASKIN1Q8WXD9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
CASKIN1Q8WXD9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC36.37■■■■□ 3.41
CASKIN1Q8WXD9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC36.36■■■■□ 3.41
CASKIN1Q8WXD9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
CASKIN1Q8WXD9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC36.36■■■■□ 3.41
CASKIN1Q8WXD9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC36.36■■■■□ 3.41
CASKIN1Q8WXD9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
CASKIN1Q8WXD9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC36.36■■■■□ 3.41
CASKIN1Q8WXD9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC36.35■■■■□ 3.41
CASKIN1Q8WXD9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC36.35■■■■□ 3.41
CASKIN1Q8WXD9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC36.35■■■■□ 3.41
CASKIN1Q8WXD9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC36.35■■■■□ 3.41
CASKIN1Q8WXD9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
CASKIN1Q8WXD9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
CASKIN1Q8WXD9 SRD5A1P1-201ENST00000442297 786 ntBASIC36.34■■■■□ 3.41
CASKIN1Q8WXD9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
CASKIN1Q8WXD9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC36.34■■■■□ 3.41
CASKIN1Q8WXD9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC36.34■■■■□ 3.41
CASKIN1Q8WXD9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC36.34■■■■□ 3.41
CASKIN1Q8WXD9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC36.34■■■■□ 3.41
CASKIN1Q8WXD9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC36.34■■■■□ 3.41
CASKIN1Q8WXD9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC36.33■■■■□ 3.41
CASKIN1Q8WXD9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC36.33■■■■□ 3.41
CASKIN1Q8WXD9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC36.33■■■■□ 3.41
CASKIN1Q8WXD9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC36.33■■■■□ 3.41
CASKIN1Q8WXD9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC36.33■■■■□ 3.41
CASKIN1Q8WXD9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC36.32■■■■□ 3.41
CASKIN1Q8WXD9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
CASKIN1Q8WXD9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC36.32■■■■□ 3.4
CASKIN1Q8WXD9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC36.32■■■■□ 3.4
CASKIN1Q8WXD9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
CASKIN1Q8WXD9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
CASKIN1Q8WXD9 UNC93B3-201ENST00000308076 687 ntBASIC36.31■■■■□ 3.4
CASKIN1Q8WXD9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC36.31■■■■□ 3.4
CASKIN1Q8WXD9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC36.31■■■■□ 3.4
CASKIN1Q8WXD9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC36.3■■■■□ 3.4
CASKIN1Q8WXD9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
CASKIN1Q8WXD9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC36.3■■■■□ 3.4
CASKIN1Q8WXD9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
CASKIN1Q8WXD9 SUDS3P1-201ENST00000505831 966 ntBASIC36.3■■■■□ 3.4
CASKIN1Q8WXD9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC36.3■■■■□ 3.4
CASKIN1Q8WXD9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC36.3■■■■□ 3.4
CASKIN1Q8WXD9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC36.3■■■■□ 3.4
CASKIN1Q8WXD9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC36.3■■■■□ 3.4
CASKIN1Q8WXD9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
CASKIN1Q8WXD9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
CASKIN1Q8WXD9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
CASKIN1Q8WXD9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC36.29■■■■□ 3.4
CASKIN1Q8WXD9 AL136162.1-201ENST00000607711 1078 ntBASIC36.29■■■■□ 3.4
CASKIN1Q8WXD9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC36.29■■■■□ 3.4
CASKIN1Q8WXD9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC36.29■■■■□ 3.4
CASKIN1Q8WXD9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC36.29■■■■□ 3.4
CASKIN1Q8WXD9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC36.28■■■■□ 3.4
CASKIN1Q8WXD9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC36.28■■■■□ 3.4
CASKIN1Q8WXD9 REST-206ENST00000612429 1376 ntTSL 5 BASIC36.28■■■■□ 3.4
CASKIN1Q8WXD9 REST-207ENST00000616975 1370 ntTSL 5 BASIC36.28■■■■□ 3.4
CASKIN1Q8WXD9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC36.28■■■■□ 3.4
CASKIN1Q8WXD9 AC135279.3-201ENST00000610945 1311 ntBASIC36.27■■■■□ 3.4
CASKIN1Q8WXD9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC36.27■■■■□ 3.4
CASKIN1Q8WXD9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC36.27■■■■□ 3.4
CASKIN1Q8WXD9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC36.27■■■■□ 3.4
CASKIN1Q8WXD9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
CASKIN1Q8WXD9 PBX2P1-201ENST00000493219 1291 ntBASIC36.26■■■■□ 3.4
CASKIN1Q8WXD9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC36.26■■■■□ 3.4
CASKIN1Q8WXD9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC36.26■■■■□ 3.4
CASKIN1Q8WXD9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC36.25■■■■□ 3.39
CASKIN1Q8WXD9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC36.25■■■■□ 3.39
CASKIN1Q8WXD9 AC024257.2-201ENST00000549699 147 ntBASIC36.25■■■■□ 3.39
CASKIN1Q8WXD9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC36.25■■■■□ 3.39
CASKIN1Q8WXD9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC36.25■■■■□ 3.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms