Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.71■■□□□ 1.07
CT55Q8WUE5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CT55Q8WUE5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.7■■□□□ 1.07
CT55Q8WUE5 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CT55Q8WUE5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CT55Q8WUE5 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CT55Q8WUE5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CT55Q8WUE5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CT55Q8WUE5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CT55Q8WUE5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.7■■□□□ 1.06
CT55Q8WUE5 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CT55Q8WUE5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.7■■□□□ 1.06
CT55Q8WUE5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CT55Q8WUE5 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CT55Q8WUE5 AC131274.2-201ENST00000580697 1507 ntBASIC21.7■■□□□ 1.06
CT55Q8WUE5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CT55Q8WUE5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CT55Q8WUE5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.69■■□□□ 1.06
CT55Q8WUE5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CT55Q8WUE5 AC142381.2-201ENST00000566120 298 ntBASIC21.69■■□□□ 1.06
CT55Q8WUE5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CT55Q8WUE5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.69■■□□□ 1.06
CT55Q8WUE5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CT55Q8WUE5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CT55Q8WUE5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CT55Q8WUE5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.68■■□□□ 1.06
CT55Q8WUE5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CT55Q8WUE5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CT55Q8WUE5 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.68■■□□□ 1.06
CT55Q8WUE5 AC135279.3-201ENST00000610945 1311 ntBASIC21.68■■□□□ 1.06
CT55Q8WUE5 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.68■■□□□ 1.06
CT55Q8WUE5 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.68■■□□□ 1.06
CT55Q8WUE5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CT55Q8WUE5 DUSP8P4-201ENST00000399538 1761 ntBASIC21.68■■□□□ 1.06
CT55Q8WUE5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CT55Q8WUE5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CT55Q8WUE5 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
CT55Q8WUE5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CT55Q8WUE5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.67■■□□□ 1.06
CT55Q8WUE5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.67■■□□□ 1.06
CT55Q8WUE5 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.67■■□□□ 1.06
CT55Q8WUE5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CT55Q8WUE5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CT55Q8WUE5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CT55Q8WUE5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.66■■□□□ 1.06
CT55Q8WUE5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CT55Q8WUE5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CT55Q8WUE5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.66■■□□□ 1.06
CT55Q8WUE5 AC024257.2-201ENST00000549699 147 ntBASIC21.66■■□□□ 1.06
CT55Q8WUE5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.66■■□□□ 1.06
CT55Q8WUE5 MIR6089-201ENST00000616698 64 ntBASIC21.66■■□□□ 1.06
CT55Q8WUE5 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.66■■□□□ 1.06
CT55Q8WUE5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.66■■□□□ 1.06
CT55Q8WUE5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CT55Q8WUE5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.65■■□□□ 1.06
CT55Q8WUE5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CT55Q8WUE5 AL031432.3-201ENST00000607698 485 ntBASIC21.65■■□□□ 1.06
CT55Q8WUE5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CT55Q8WUE5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CT55Q8WUE5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CT55Q8WUE5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CT55Q8WUE5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CT55Q8WUE5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CT55Q8WUE5 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CT55Q8WUE5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CT55Q8WUE5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CT55Q8WUE5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CT55Q8WUE5 ZNRF2P3-201ENST00000424200 374 ntBASIC21.63■■□□□ 1.05
CT55Q8WUE5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
CT55Q8WUE5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.63■■□□□ 1.05
CT55Q8WUE5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
CT55Q8WUE5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.63■■□□□ 1.05
CT55Q8WUE5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CT55Q8WUE5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CT55Q8WUE5 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CT55Q8WUE5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CT55Q8WUE5 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CT55Q8WUE5 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CT55Q8WUE5 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CT55Q8WUE5 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.62■■□□□ 1.05
CT55Q8WUE5 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CT55Q8WUE5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CT55Q8WUE5 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CT55Q8WUE5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CT55Q8WUE5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CT55Q8WUE5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CT55Q8WUE5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.62■■□□□ 1.05
CT55Q8WUE5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.62■■□□□ 1.05
CT55Q8WUE5 SUDS3P1-201ENST00000505831 966 ntBASIC21.62■■□□□ 1.05
CT55Q8WUE5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.62■■□□□ 1.05
CT55Q8WUE5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.62■■□□□ 1.05
CT55Q8WUE5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CT55Q8WUE5 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CT55Q8WUE5 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CT55Q8WUE5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.61■■□□□ 1.05
CT55Q8WUE5 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CT55Q8WUE5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.61■■□□□ 1.05
CT55Q8WUE5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CT55Q8WUE5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.6■■□□□ 1.05
CT55Q8WUE5 EDA-201ENST00000338901 1233 ntBASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms