Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC28.74■■■□□ 2.19
SSH3Q8TE77 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC28.74■■■□□ 2.19
SSH3Q8TE77 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SSH3Q8TE77 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SSH3Q8TE77 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
SSH3Q8TE77 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SSH3Q8TE77 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC28.73■■■□□ 2.19
SSH3Q8TE77 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SSH3Q8TE77 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.73■■■□□ 2.19
SSH3Q8TE77 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
SSH3Q8TE77 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
SSH3Q8TE77 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
SSH3Q8TE77 CD37-213ENST00000598095 1598 ntTSL 2 BASIC28.72■■■□□ 2.19
SSH3Q8TE77 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SSH3Q8TE77 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SSH3Q8TE77 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
SSH3Q8TE77 OR2A1-AS1-204ENST00000470435 602 ntBASIC28.72■■■□□ 2.19
SSH3Q8TE77 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SSH3Q8TE77 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SSH3Q8TE77 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
SSH3Q8TE77 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC28.72■■■□□ 2.19
SSH3Q8TE77 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SSH3Q8TE77 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC28.71■■■□□ 2.19
SSH3Q8TE77 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC28.71■■■□□ 2.19
SSH3Q8TE77 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC28.71■■■□□ 2.19
SSH3Q8TE77 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
SSH3Q8TE77 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
SSH3Q8TE77 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
SSH3Q8TE77 AC141586.4-201ENST00000624558 1573 ntBASIC28.71■■■□□ 2.19
SSH3Q8TE77 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
SSH3Q8TE77 HES6-204ENST00000409182 863 ntTSL 2 BASIC28.7■■■□□ 2.18
SSH3Q8TE77 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
SSH3Q8TE77 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC28.7■■■□□ 2.18
SSH3Q8TE77 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC28.7■■■□□ 2.18
SSH3Q8TE77 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC28.69■■■□□ 2.18
SSH3Q8TE77 MIR4787-201ENST00000607364 84 ntBASIC28.69■■■□□ 2.18
SSH3Q8TE77 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC28.69■■■□□ 2.18
SSH3Q8TE77 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC28.69■■■□□ 2.18
SSH3Q8TE77 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SSH3Q8TE77 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
SSH3Q8TE77 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
SSH3Q8TE77 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SSH3Q8TE77 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC28.68■■■□□ 2.18
SSH3Q8TE77 KRT125P-201ENST00000546827 989 ntBASIC28.68■■■□□ 2.18
SSH3Q8TE77 TRIR-205ENST00000592273 783 ntTSL 3 BASIC28.68■■■□□ 2.18
SSH3Q8TE77 SNX5-217ENST00000606557 1087 ntBASIC28.68■■■□□ 2.18
SSH3Q8TE77 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
SSH3Q8TE77 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC28.67■■■□□ 2.18
SSH3Q8TE77 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC28.67■■■□□ 2.18
SSH3Q8TE77 AC004448.1-201ENST00000458332 883 ntBASIC28.67■■■□□ 2.18
SSH3Q8TE77 AC092028.1-203ENST00000608262 953 ntBASIC28.67■■■□□ 2.18
SSH3Q8TE77 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC28.67■■■□□ 2.18
SSH3Q8TE77 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC28.67■■■□□ 2.18
SSH3Q8TE77 AL161729.1-201ENST00000604104 1402 ntBASIC28.67■■■□□ 2.18
SSH3Q8TE77 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC28.66■■■□□ 2.18
SSH3Q8TE77 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SSH3Q8TE77 AL022069.1-201ENST00000568025 1636 ntBASIC28.66■■■□□ 2.18
SSH3Q8TE77 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC28.66■■■□□ 2.18
SSH3Q8TE77 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SSH3Q8TE77 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SSH3Q8TE77 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SSH3Q8TE77 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC28.66■■■□□ 2.18
SSH3Q8TE77 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC28.65■■■□□ 2.18
SSH3Q8TE77 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SSH3Q8TE77 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SSH3Q8TE77 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC28.65■■■□□ 2.18
SSH3Q8TE77 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
SSH3Q8TE77 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SSH3Q8TE77 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SSH3Q8TE77 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SSH3Q8TE77 GUSBP5-201ENST00000418136 578 ntBASIC28.64■■■□□ 2.18
SSH3Q8TE77 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
SSH3Q8TE77 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SSH3Q8TE77 CREM-229ENST00000474362 1030 ntTSL 2 BASIC28.63■■■□□ 2.17
SSH3Q8TE77 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC28.63■■■□□ 2.17
SSH3Q8TE77 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SSH3Q8TE77 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SSH3Q8TE77 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SSH3Q8TE77 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
SSH3Q8TE77 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SSH3Q8TE77 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
SSH3Q8TE77 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC28.62■■■□□ 2.17
SSH3Q8TE77 STK32C-205ENST00000456004 607 ntTSL 2 BASIC28.62■■■□□ 2.17
SSH3Q8TE77 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC28.62■■■□□ 2.17
SSH3Q8TE77 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SSH3Q8TE77 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SSH3Q8TE77 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC28.62■■■□□ 2.17
SSH3Q8TE77 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SSH3Q8TE77 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SSH3Q8TE77 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SSH3Q8TE77 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SSH3Q8TE77 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.61■■■□□ 2.17
SSH3Q8TE77 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC28.61■■■□□ 2.17
SSH3Q8TE77 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
SSH3Q8TE77 AC004812.2-201ENST00000611079 2094 ntBASIC28.6■■■□□ 2.17
SSH3Q8TE77 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
SSH3Q8TE77 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC28.6■■■□□ 2.17
SSH3Q8TE77 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
SSH3Q8TE77 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
SSH3Q8TE77 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms