Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHD6Q8TD26 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.45■■□□□ 1.02
CHD6Q8TD26 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.45■■□□□ 1.02
CHD6Q8TD26 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.45■■□□□ 1.02
CHD6Q8TD26 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHD6Q8TD26 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHD6Q8TD26 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.45■■□□□ 1.02
CHD6Q8TD26 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHD6Q8TD26 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHD6Q8TD26 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.45■■□□□ 1.02
CHD6Q8TD26 KRT18P61-201ENST00000585825 1298 ntBASIC21.45■■□□□ 1.02
CHD6Q8TD26 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.45■■□□□ 1.02
CHD6Q8TD26 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.45■■□□□ 1.02
CHD6Q8TD26 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.44■■□□□ 1.02
CHD6Q8TD26 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.44■■□□□ 1.02
CHD6Q8TD26 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.44■■□□□ 1.02
CHD6Q8TD26 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.44■■□□□ 1.02
CHD6Q8TD26 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHD6Q8TD26 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHD6Q8TD26 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHD6Q8TD26 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.44■■□□□ 1.02
CHD6Q8TD26 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.43■■□□□ 1.02
CHD6Q8TD26 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.43■■□□□ 1.02
CHD6Q8TD26 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.43■■□□□ 1.02
CHD6Q8TD26 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHD6Q8TD26 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHD6Q8TD26 AC016769.1-201ENST00000409132 1010 ntBASIC21.43■■□□□ 1.02
CHD6Q8TD26 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.43■■□□□ 1.02
CHD6Q8TD26 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD6Q8TD26 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CHD6Q8TD26 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CHD6Q8TD26 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CHD6Q8TD26 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CHD6Q8TD26 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
CHD6Q8TD26 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
CHD6Q8TD26 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD6Q8TD26 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CHD6Q8TD26 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.42■■□□□ 1.02
CHD6Q8TD26 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.42■■□□□ 1.02
CHD6Q8TD26 MIR663A-201ENST00000385250 93 ntBASIC21.41■■□□□ 1.02
CHD6Q8TD26 MIR1224-201ENST00000408193 85 ntBASIC21.41■■□□□ 1.02
CHD6Q8TD26 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHD6Q8TD26 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.41■■□□□ 1.02
CHD6Q8TD26 FAM201B-201ENST00000458407 597 ntBASIC21.41■■□□□ 1.02
CHD6Q8TD26 SMUG1P1-201ENST00000590640 811 ntBASIC21.41■■□□□ 1.02
CHD6Q8TD26 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.41■■□□□ 1.02
CHD6Q8TD26 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.41■■□□□ 1.02
CHD6Q8TD26 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHD6Q8TD26 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.4■■□□□ 1.02
CHD6Q8TD26 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHD6Q8TD26 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.4■■□□□ 1.02
CHD6Q8TD26 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CHD6Q8TD26 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.4■■□□□ 1.02
CHD6Q8TD26 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHD6Q8TD26 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHD6Q8TD26 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.4■■□□□ 1.02
CHD6Q8TD26 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHD6Q8TD26 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.4■■□□□ 1.02
CHD6Q8TD26 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
CHD6Q8TD26 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
CHD6Q8TD26 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
CHD6Q8TD26 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CHD6Q8TD26 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CHD6Q8TD26 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD6Q8TD26 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD6Q8TD26 AC012414.1-201ENST00000556676 535 ntBASIC21.39■■□□□ 1.01
CHD6Q8TD26 TSPY26P-201ENST00000476365 1326 ntBASIC21.39■■□□□ 1.01
CHD6Q8TD26 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CHD6Q8TD26 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD6Q8TD26 GPX1P1-201ENST00000388829 606 ntBASIC21.38■■□□□ 1.01
CHD6Q8TD26 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.38■■□□□ 1.01
CHD6Q8TD26 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.38■■□□□ 1.01
CHD6Q8TD26 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.38■■□□□ 1.01
CHD6Q8TD26 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD6Q8TD26 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD6Q8TD26 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD6Q8TD26 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
CHD6Q8TD26 AC137761.2-201ENST00000561729 223 ntBASIC21.38■■□□□ 1.01
CHD6Q8TD26 AC145350.3-201ENST00000569033 163 ntBASIC21.38■■□□□ 1.01
CHD6Q8TD26 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.38■■□□□ 1.01
CHD6Q8TD26 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHD6Q8TD26 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CHD6Q8TD26 BX842568.3-201ENST00000418104 571 ntBASIC21.37■■□□□ 1.01
CHD6Q8TD26 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHD6Q8TD26 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.37■■□□□ 1.01
CHD6Q8TD26 AC092171.4-201ENST00000609130 632 ntBASIC21.37■■□□□ 1.01
CHD6Q8TD26 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHD6Q8TD26 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.37■■□□□ 1.01
CHD6Q8TD26 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHD6Q8TD26 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
CHD6Q8TD26 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.36■■□□□ 1.01
CHD6Q8TD26 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CHD6Q8TD26 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD6Q8TD26 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD6Q8TD26 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.36■■□□□ 1.01
CHD6Q8TD26 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHD6Q8TD26 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD6Q8TD26 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD6Q8TD26 AC245100.8-202ENST00000629247 1058 ntBASIC21.35■■□□□ 1.01
CHD6Q8TD26 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms