Protein–RNA interactions for Protein: Q8NER1

TRPV1, Transient receptor potential cation channel subfamily V member 1, humanhuman

Predictions only

Length 839 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1Q8NER1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.15■■□□□ 1.78
TRPV1Q8NER1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.15■■□□□ 1.78
TRPV1Q8NER1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRPV1Q8NER1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TRPV1Q8NER1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC26.14■■□□□ 1.78
TRPV1Q8NER1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
TRPV1Q8NER1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TRPV1Q8NER1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
TRPV1Q8NER1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRPV1Q8NER1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRPV1Q8NER1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
TRPV1Q8NER1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TRPV1Q8NER1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC26.13■■□□□ 1.77
TRPV1Q8NER1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TRPV1Q8NER1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRPV1Q8NER1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TRPV1Q8NER1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.12■■□□□ 1.77
TRPV1Q8NER1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TRPV1Q8NER1 AL162430.1-201ENST00000480705 870 ntBASIC26.12■■□□□ 1.77
TRPV1Q8NER1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC26.12■■□□□ 1.77
TRPV1Q8NER1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
TRPV1Q8NER1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
TRPV1Q8NER1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TRPV1Q8NER1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRPV1Q8NER1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TRPV1Q8NER1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TRPV1Q8NER1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRPV1Q8NER1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRPV1Q8NER1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TRPV1Q8NER1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
TRPV1Q8NER1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRPV1Q8NER1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.11■■□□□ 1.77
TRPV1Q8NER1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC26.11■■□□□ 1.77
TRPV1Q8NER1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TRPV1Q8NER1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.11■■□□□ 1.77
TRPV1Q8NER1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TRPV1Q8NER1 RASA4CP-201ENST00000424092 1398 ntBASIC26.1■■□□□ 1.77
TRPV1Q8NER1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
TRPV1Q8NER1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TRPV1Q8NER1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
TRPV1Q8NER1 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.09■■□□□ 1.77
TRPV1Q8NER1 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.09■■□□□ 1.77
TRPV1Q8NER1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
TRPV1Q8NER1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
TRPV1Q8NER1 AC099791.2-201ENST00000605725 427 ntBASIC26.09■■□□□ 1.77
TRPV1Q8NER1 AC131274.2-201ENST00000580697 1507 ntBASIC26.09■■□□□ 1.77
TRPV1Q8NER1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRPV1Q8NER1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.08■■□□□ 1.77
TRPV1Q8NER1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.08■■□□□ 1.77
TRPV1Q8NER1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.08■■□□□ 1.77
TRPV1Q8NER1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TRPV1Q8NER1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
TRPV1Q8NER1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TRPV1Q8NER1 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.07■■□□□ 1.76
TRPV1Q8NER1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TRPV1Q8NER1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.07■■□□□ 1.76
TRPV1Q8NER1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TRPV1Q8NER1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TRPV1Q8NER1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TRPV1Q8NER1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
TRPV1Q8NER1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
TRPV1Q8NER1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TRPV1Q8NER1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TRPV1Q8NER1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.05■■□□□ 1.76
TRPV1Q8NER1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.05■■□□□ 1.76
TRPV1Q8NER1 AC092171.4-201ENST00000609130 632 ntBASIC26.05■■□□□ 1.76
TRPV1Q8NER1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.05■■□□□ 1.76
TRPV1Q8NER1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TRPV1Q8NER1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TRPV1Q8NER1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.04■■□□□ 1.76
TRPV1Q8NER1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TRPV1Q8NER1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC26.04■■□□□ 1.76
TRPV1Q8NER1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.04■■□□□ 1.76
TRPV1Q8NER1 AC027682.1-201ENST00000562846 899 ntBASIC26.04■■□□□ 1.76
TRPV1Q8NER1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.04■■□□□ 1.76
TRPV1Q8NER1 AC008764.7-201ENST00000593779 1081 ntBASIC26.04■■□□□ 1.76
TRPV1Q8NER1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.04■■□□□ 1.76
TRPV1Q8NER1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TRPV1Q8NER1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TRPV1Q8NER1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
TRPV1Q8NER1 AC010501.1-201ENST00000606270 1962 ntBASIC26.04■■□□□ 1.76
TRPV1Q8NER1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
TRPV1Q8NER1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.03■■□□□ 1.76
TRPV1Q8NER1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.03■■□□□ 1.76
TRPV1Q8NER1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.03■■□□□ 1.76
TRPV1Q8NER1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.02■■□□□ 1.76
TRPV1Q8NER1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
TRPV1Q8NER1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.02■■□□□ 1.76
TRPV1Q8NER1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.02■■□□□ 1.76
TRPV1Q8NER1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.02■■□□□ 1.76
TRPV1Q8NER1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.02■■□□□ 1.76
TRPV1Q8NER1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.02■■□□□ 1.76
TRPV1Q8NER1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.01■■□□□ 1.75
TRPV1Q8NER1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC26.01■■□□□ 1.75
TRPV1Q8NER1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.01■■□□□ 1.75
TRPV1Q8NER1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
TRPV1Q8NER1 AC009102.2-201ENST00000606772 1639 ntBASIC26.01■■□□□ 1.75
TRPV1Q8NER1 AC011298.3-201ENST00000615796 283 ntBASIC26.01■■□□□ 1.75
TRPV1Q8NER1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TRPV1Q8NER1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms