Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
SHCBP1Q8NEM2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
SHCBP1Q8NEM2 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.5■■□□□ 1.83
SHCBP1Q8NEM2 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.5■■□□□ 1.83
SHCBP1Q8NEM2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.5■■□□□ 1.83
SHCBP1Q8NEM2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SHCBP1Q8NEM2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
SHCBP1Q8NEM2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SHCBP1Q8NEM2 AC092803.2-201ENST00000564287 1899 ntBASIC26.5■■□□□ 1.83
SHCBP1Q8NEM2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SHCBP1Q8NEM2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
SHCBP1Q8NEM2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.49■■□□□ 1.83
SHCBP1Q8NEM2 AC131274.2-201ENST00000580697 1507 ntBASIC26.49■■□□□ 1.83
SHCBP1Q8NEM2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SHCBP1Q8NEM2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.49■■□□□ 1.83
SHCBP1Q8NEM2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.49■■□□□ 1.83
SHCBP1Q8NEM2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.49■■□□□ 1.83
SHCBP1Q8NEM2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.49■■□□□ 1.83
SHCBP1Q8NEM2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHCBP1Q8NEM2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHCBP1Q8NEM2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHCBP1Q8NEM2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
SHCBP1Q8NEM2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
SHCBP1Q8NEM2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
SHCBP1Q8NEM2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHCBP1Q8NEM2 AC092171.4-201ENST00000609130 632 ntBASIC26.48■■□□□ 1.83
SHCBP1Q8NEM2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHCBP1Q8NEM2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHCBP1Q8NEM2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.48■■□□□ 1.83
SHCBP1Q8NEM2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHCBP1Q8NEM2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SHCBP1Q8NEM2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SHCBP1Q8NEM2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SHCBP1Q8NEM2 AC026271.2-201ENST00000428091 497 ntBASIC26.47■■□□□ 1.83
SHCBP1Q8NEM2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.47■■□□□ 1.83
SHCBP1Q8NEM2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.47■■□□□ 1.83
SHCBP1Q8NEM2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.47■■□□□ 1.83
SHCBP1Q8NEM2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.47■■□□□ 1.83
SHCBP1Q8NEM2 AL136967.2-201ENST00000623968 743 ntBASIC26.47■■□□□ 1.83
SHCBP1Q8NEM2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SHCBP1Q8NEM2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SHCBP1Q8NEM2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SHCBP1Q8NEM2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
SHCBP1Q8NEM2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.46■■□□□ 1.83
SHCBP1Q8NEM2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.46■■□□□ 1.83
SHCBP1Q8NEM2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.46■■□□□ 1.83
SHCBP1Q8NEM2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
SHCBP1Q8NEM2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
SHCBP1Q8NEM2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SHCBP1Q8NEM2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SHCBP1Q8NEM2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SHCBP1Q8NEM2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SHCBP1Q8NEM2 MIR939-201ENST00000401314 82 ntBASIC26.45■■□□□ 1.82
SHCBP1Q8NEM2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.45■■□□□ 1.82
SHCBP1Q8NEM2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
SHCBP1Q8NEM2 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.45■■□□□ 1.82
SHCBP1Q8NEM2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.45■■□□□ 1.82
SHCBP1Q8NEM2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SHCBP1Q8NEM2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
SHCBP1Q8NEM2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SHCBP1Q8NEM2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SHCBP1Q8NEM2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SHCBP1Q8NEM2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.44■■□□□ 1.82
SHCBP1Q8NEM2 AF213884.3-201ENST00000563833 479 ntBASIC26.44■■□□□ 1.82
SHCBP1Q8NEM2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.44■■□□□ 1.82
SHCBP1Q8NEM2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SHCBP1Q8NEM2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
SHCBP1Q8NEM2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SHCBP1Q8NEM2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.43■■□□□ 1.82
SHCBP1Q8NEM2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.43■■□□□ 1.82
SHCBP1Q8NEM2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
SHCBP1Q8NEM2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.43■■□□□ 1.82
SHCBP1Q8NEM2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SHCBP1Q8NEM2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SHCBP1Q8NEM2 SYT6-210ENST00000641643 1587 ntBASIC26.42■■□□□ 1.82
SHCBP1Q8NEM2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
SHCBP1Q8NEM2 AP001330.3-201ENST00000520123 633 ntBASIC26.42■■□□□ 1.82
SHCBP1Q8NEM2 MIR6089-201ENST00000616698 64 ntBASIC26.42■■□□□ 1.82
SHCBP1Q8NEM2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
SHCBP1Q8NEM2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SHCBP1Q8NEM2 AC105265.2-201ENST00000467189 838 ntBASIC26.41■■□□□ 1.82
SHCBP1Q8NEM2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SHCBP1Q8NEM2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SHCBP1Q8NEM2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SHCBP1Q8NEM2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.4■■□□□ 1.82
SHCBP1Q8NEM2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SHCBP1Q8NEM2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26.4■■□□□ 1.82
SHCBP1Q8NEM2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SHCBP1Q8NEM2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
SHCBP1Q8NEM2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SHCBP1Q8NEM2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.39■■□□□ 1.82
SHCBP1Q8NEM2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
SHCBP1Q8NEM2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.39■■□□□ 1.82
SHCBP1Q8NEM2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SHCBP1Q8NEM2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.39■■□□□ 1.82
SHCBP1Q8NEM2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.39■■□□□ 1.81
SHCBP1Q8NEM2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
SHCBP1Q8NEM2 SLC6A10P-202ENST00000431994 2058 ntBASIC26.38■■□□□ 1.81
SHCBP1Q8NEM2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SHCBP1Q8NEM2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms