Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC27.38■■□□□ 1.97
SLC44A5Q8NCS7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC27.38■■□□□ 1.97
SLC44A5Q8NCS7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SLC44A5Q8NCS7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC27.37■■□□□ 1.97
SLC44A5Q8NCS7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC27.37■■□□□ 1.97
SLC44A5Q8NCS7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
SLC44A5Q8NCS7 AK3-203ENST00000447596 705 ntTSL 2 BASIC27.37■■□□□ 1.97
SLC44A5Q8NCS7 AC004448.1-201ENST00000458332 883 ntBASIC27.37■■□□□ 1.97
SLC44A5Q8NCS7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.37■■□□□ 1.97
SLC44A5Q8NCS7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SLC44A5Q8NCS7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.36■■□□□ 1.97
SLC44A5Q8NCS7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.36■■□□□ 1.97
SLC44A5Q8NCS7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC27.36■■□□□ 1.97
SLC44A5Q8NCS7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SLC44A5Q8NCS7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.36■■□□□ 1.97
SLC44A5Q8NCS7 AL356740.2-201ENST00000601559 647 ntBASIC27.36■■□□□ 1.97
SLC44A5Q8NCS7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
SLC44A5Q8NCS7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SLC44A5Q8NCS7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
SLC44A5Q8NCS7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC27.35■■□□□ 1.97
SLC44A5Q8NCS7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SLC44A5Q8NCS7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
SLC44A5Q8NCS7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
SLC44A5Q8NCS7 AL512631.2-201ENST00000604634 923 ntBASIC27.35■■□□□ 1.97
SLC44A5Q8NCS7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SLC44A5Q8NCS7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SLC44A5Q8NCS7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SLC44A5Q8NCS7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SLC44A5Q8NCS7 AL136116.3-201ENST00000402907 1138 ntBASIC27.34■■□□□ 1.97
SLC44A5Q8NCS7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC27.34■■□□□ 1.97
SLC44A5Q8NCS7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SLC44A5Q8NCS7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
SLC44A5Q8NCS7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
SLC44A5Q8NCS7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC27.33■■□□□ 1.97
SLC44A5Q8NCS7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC27.33■■□□□ 1.97
SLC44A5Q8NCS7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SLC44A5Q8NCS7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SLC44A5Q8NCS7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC27.33■■□□□ 1.97
SLC44A5Q8NCS7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SLC44A5Q8NCS7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
SLC44A5Q8NCS7 AC022211.4-201ENST00000625094 2161 ntBASIC27.33■■□□□ 1.97
SLC44A5Q8NCS7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SLC44A5Q8NCS7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
SLC44A5Q8NCS7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
SLC44A5Q8NCS7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SLC44A5Q8NCS7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SLC44A5Q8NCS7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SLC44A5Q8NCS7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SLC44A5Q8NCS7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC27.32■■□□□ 1.96
SLC44A5Q8NCS7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC27.32■■□□□ 1.96
SLC44A5Q8NCS7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SLC44A5Q8NCS7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SLC44A5Q8NCS7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SLC44A5Q8NCS7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC27.31■■□□□ 1.96
SLC44A5Q8NCS7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SLC44A5Q8NCS7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SLC44A5Q8NCS7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
SLC44A5Q8NCS7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SLC44A5Q8NCS7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
SLC44A5Q8NCS7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SLC44A5Q8NCS7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC27.3■■□□□ 1.96
SLC44A5Q8NCS7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
SLC44A5Q8NCS7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
SLC44A5Q8NCS7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SLC44A5Q8NCS7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC27.29■■□□□ 1.96
SLC44A5Q8NCS7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SLC44A5Q8NCS7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC27.29■■□□□ 1.96
SLC44A5Q8NCS7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.29■■□□□ 1.96
SLC44A5Q8NCS7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SLC44A5Q8NCS7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
SLC44A5Q8NCS7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC27.29■■□□□ 1.96
SLC44A5Q8NCS7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC27.29■■□□□ 1.96
SLC44A5Q8NCS7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC27.29■■□□□ 1.96
SLC44A5Q8NCS7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC27.29■■□□□ 1.96
SLC44A5Q8NCS7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC27.29■■□□□ 1.96
SLC44A5Q8NCS7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
SLC44A5Q8NCS7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC27.29■■□□□ 1.96
SLC44A5Q8NCS7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC27.28■■□□□ 1.96
SLC44A5Q8NCS7 HLA-L-211ENST00000482052 1765 ntBASIC27.28■■□□□ 1.96
SLC44A5Q8NCS7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
SLC44A5Q8NCS7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC27.28■■□□□ 1.96
SLC44A5Q8NCS7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
SLC44A5Q8NCS7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
SLC44A5Q8NCS7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SLC44A5Q8NCS7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SLC44A5Q8NCS7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
SLC44A5Q8NCS7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SLC44A5Q8NCS7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC27.27■■□□□ 1.96
SLC44A5Q8NCS7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SLC44A5Q8NCS7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SLC44A5Q8NCS7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SLC44A5Q8NCS7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
SLC44A5Q8NCS7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC27.27■■□□□ 1.96
SLC44A5Q8NCS7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC27.27■■□□□ 1.96
SLC44A5Q8NCS7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SLC44A5Q8NCS7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SLC44A5Q8NCS7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SLC44A5Q8NCS7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SLC44A5Q8NCS7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SLC44A5Q8NCS7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms