Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDRT4Q8N9R6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDRT4Q8N9R6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDRT4Q8N9R6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.48■■□□□ 1.03
CDRT4Q8N9R6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.48■■□□□ 1.03
CDRT4Q8N9R6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDRT4Q8N9R6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDRT4Q8N9R6 AC103834.1-201ENST00000520383 144 ntBASIC21.48■■□□□ 1.03
CDRT4Q8N9R6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.48■■□□□ 1.03
CDRT4Q8N9R6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDRT4Q8N9R6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDRT4Q8N9R6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDRT4Q8N9R6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDRT4Q8N9R6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDRT4Q8N9R6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDRT4Q8N9R6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.47■■□□□ 1.03
CDRT4Q8N9R6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDRT4Q8N9R6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDRT4Q8N9R6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.47■■□□□ 1.03
CDRT4Q8N9R6 KRT8P33-201ENST00000508125 1423 ntBASIC21.46■■□□□ 1.03
CDRT4Q8N9R6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDRT4Q8N9R6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDRT4Q8N9R6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
CDRT4Q8N9R6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.46■■□□□ 1.03
CDRT4Q8N9R6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDRT4Q8N9R6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CDRT4Q8N9R6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDRT4Q8N9R6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.46■■□□□ 1.03
CDRT4Q8N9R6 MIR4281-201ENST00000580852 62 ntBASIC21.46■■□□□ 1.03
CDRT4Q8N9R6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.46■■□□□ 1.03
CDRT4Q8N9R6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CDRT4Q8N9R6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.46■■□□□ 1.03
CDRT4Q8N9R6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDRT4Q8N9R6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.46■■□□□ 1.03
CDRT4Q8N9R6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.46■■□□□ 1.03
CDRT4Q8N9R6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDRT4Q8N9R6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
CDRT4Q8N9R6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CDRT4Q8N9R6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CDRT4Q8N9R6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.45■■□□□ 1.02
CDRT4Q8N9R6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CDRT4Q8N9R6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDRT4Q8N9R6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDRT4Q8N9R6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDRT4Q8N9R6 AL022069.1-201ENST00000568025 1636 ntBASIC21.44■■□□□ 1.02
CDRT4Q8N9R6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDRT4Q8N9R6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.44■■□□□ 1.02
CDRT4Q8N9R6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDRT4Q8N9R6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDRT4Q8N9R6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDRT4Q8N9R6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.44■■□□□ 1.02
CDRT4Q8N9R6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDRT4Q8N9R6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.43■■□□□ 1.02
CDRT4Q8N9R6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.43■■□□□ 1.02
CDRT4Q8N9R6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.43■■□□□ 1.02
CDRT4Q8N9R6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CDRT4Q8N9R6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDRT4Q8N9R6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDRT4Q8N9R6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CDRT4Q8N9R6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CDRT4Q8N9R6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDRT4Q8N9R6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CDRT4Q8N9R6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDRT4Q8N9R6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.42■■□□□ 1.02
CDRT4Q8N9R6 AC103724.3-201ENST00000564481 992 ntBASIC21.42■■□□□ 1.02
CDRT4Q8N9R6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.42■■□□□ 1.02
CDRT4Q8N9R6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDRT4Q8N9R6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDRT4Q8N9R6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CDRT4Q8N9R6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDRT4Q8N9R6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.41■■□□□ 1.02
CDRT4Q8N9R6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDRT4Q8N9R6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CDRT4Q8N9R6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDRT4Q8N9R6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.41■■□□□ 1.02
CDRT4Q8N9R6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.41■■□□□ 1.02
CDRT4Q8N9R6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDRT4Q8N9R6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDRT4Q8N9R6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDRT4Q8N9R6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDRT4Q8N9R6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDRT4Q8N9R6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDRT4Q8N9R6 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.4■■□□□ 1.02
CDRT4Q8N9R6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.4■■□□□ 1.02
CDRT4Q8N9R6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDRT4Q8N9R6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDRT4Q8N9R6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDRT4Q8N9R6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDRT4Q8N9R6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDRT4Q8N9R6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDRT4Q8N9R6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDRT4Q8N9R6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.39■■□□□ 1.01
CDRT4Q8N9R6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CDRT4Q8N9R6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDRT4Q8N9R6 AF131216.4-201ENST00000638924 1588 ntBASIC21.39■■□□□ 1.01
CDRT4Q8N9R6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDRT4Q8N9R6 ABCB10P4-201ENST00000566803 2184 ntBASIC21.38■■□□□ 1.01
CDRT4Q8N9R6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDRT4Q8N9R6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
CDRT4Q8N9R6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms