Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD3Q7Z407 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
CSMD3Q7Z407 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD3Q7Z407 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CSMD3Q7Z407 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSMD3Q7Z407 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.3■□□□□ 0.2
CSMD3Q7Z407 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD3Q7Z407 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD3Q7Z407 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD3Q7Z407 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.29■□□□□ 0.2
CSMD3Q7Z407 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.29■□□□□ 0.2
CSMD3Q7Z407 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.29■□□□□ 0.2
CSMD3Q7Z407 PKM-203ENST00000389093 2279 ntTSL 5 BASIC16.29■□□□□ 0.2
CSMD3Q7Z407 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD3Q7Z407 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.29■□□□□ 0.2
CSMD3Q7Z407 AC011298.3-201ENST00000615796 283 ntBASIC16.29■□□□□ 0.2
CSMD3Q7Z407 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSMD3Q7Z407 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CSMD3Q7Z407 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.28■□□□□ 0.2
CSMD3Q7Z407 YBX1P1-201ENST00000445822 960 ntBASIC16.28■□□□□ 0.2
CSMD3Q7Z407 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSMD3Q7Z407 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC16.28■□□□□ 0.2
CSMD3Q7Z407 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSMD3Q7Z407 DUX4L19-201ENST00000557448 1267 ntBASIC16.28■□□□□ 0.2
CSMD3Q7Z407 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD3Q7Z407 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD3Q7Z407 AC004448.1-201ENST00000458332 883 ntBASIC16.27■□□□□ 0.2
CSMD3Q7Z407 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD3Q7Z407 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.27■□□□□ 0.2
CSMD3Q7Z407 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.27■□□□□ 0.2
CSMD3Q7Z407 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD3Q7Z407 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.27■□□□□ 0.2
CSMD3Q7Z407 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.27■□□□□ 0.2
CSMD3Q7Z407 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CSMD3Q7Z407 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.19
CSMD3Q7Z407 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.27■□□□□ 0.19
CSMD3Q7Z407 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CSMD3Q7Z407 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CSMD3Q7Z407 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CSMD3Q7Z407 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CSMD3Q7Z407 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.27■□□□□ 0.19
CSMD3Q7Z407 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CSMD3Q7Z407 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.27■□□□□ 0.19
CSMD3Q7Z407 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD3Q7Z407 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD3Q7Z407 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD3Q7Z407 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.26■□□□□ 0.19
CSMD3Q7Z407 DUX4L2-201ENST00000561772 1275 ntBASIC16.26■□□□□ 0.19
CSMD3Q7Z407 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
CSMD3Q7Z407 DUX4L6-201ENST00000626483 1275 ntBASIC16.26■□□□□ 0.19
CSMD3Q7Z407 DUX4L1-201ENST00000627662 1275 ntBASIC16.26■□□□□ 0.19
CSMD3Q7Z407 DUX4L8-201ENST00000629013 1275 ntBASIC16.26■□□□□ 0.19
CSMD3Q7Z407 DUX4L3-201ENST00000630187 1275 ntBASIC16.26■□□□□ 0.19
CSMD3Q7Z407 DUX4L7-201ENST00000630678 1275 ntBASIC16.26■□□□□ 0.19
CSMD3Q7Z407 DUX4L5-201ENST00000630834 1275 ntBASIC16.26■□□□□ 0.19
CSMD3Q7Z407 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
CSMD3Q7Z407 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.26■□□□□ 0.19
CSMD3Q7Z407 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.26■□□□□ 0.19
CSMD3Q7Z407 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC16.26■□□□□ 0.19
CSMD3Q7Z407 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD3Q7Z407 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD3Q7Z407 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD3Q7Z407 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.25■□□□□ 0.19
CSMD3Q7Z407 ERN1-208ENST00000606895 2068 ntBASIC16.25■□□□□ 0.19
CSMD3Q7Z407 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC16.25■□□□□ 0.19
CSMD3Q7Z407 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC16.25■□□□□ 0.19
CSMD3Q7Z407 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD3Q7Z407 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD3Q7Z407 AC233992.3-201ENST00000607491 485 ntBASIC16.25■□□□□ 0.19
CSMD3Q7Z407 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CSMD3Q7Z407 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD3Q7Z407 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD3Q7Z407 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC16.25■□□□□ 0.19
CSMD3Q7Z407 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD3Q7Z407 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD3Q7Z407 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CSMD3Q7Z407 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD3Q7Z407 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CSMD3Q7Z407 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD3Q7Z407 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.24■□□□□ 0.19
CSMD3Q7Z407 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC16.24■□□□□ 0.19
CSMD3Q7Z407 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD3Q7Z407 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.24■□□□□ 0.19
CSMD3Q7Z407 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.24■□□□□ 0.19
CSMD3Q7Z407 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD3Q7Z407 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.24■□□□□ 0.19
CSMD3Q7Z407 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.24■□□□□ 0.19
CSMD3Q7Z407 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD3Q7Z407 AC099791.1-201ENST00000416440 715 ntBASIC16.24■□□□□ 0.19
CSMD3Q7Z407 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD3Q7Z407 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD3Q7Z407 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD3Q7Z407 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.23■□□□□ 0.19
CSMD3Q7Z407 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.23■□□□□ 0.19
CSMD3Q7Z407 MIR6722-201ENST00000617286 78 ntBASIC16.23■□□□□ 0.19
CSMD3Q7Z407 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CSMD3Q7Z407 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CSMD3Q7Z407 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD3Q7Z407 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.23■□□□□ 0.19
CSMD3Q7Z407 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms