Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.99■□□□□ 0.95
NIPAL3Q6P499 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NIPAL3Q6P499 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NIPAL3Q6P499 FOXO3B-201ENST00000395675 1928 ntBASIC20.98■□□□□ 0.95
NIPAL3Q6P499 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NIPAL3Q6P499 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
NIPAL3Q6P499 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.98■□□□□ 0.95
NIPAL3Q6P499 ABCB10P4-201ENST00000566803 2184 ntBASIC20.98■□□□□ 0.95
NIPAL3Q6P499 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NIPAL3Q6P499 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NIPAL3Q6P499 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.98■□□□□ 0.95
NIPAL3Q6P499 LONRF2P2-201ENST00000439212 571 ntBASIC20.98■□□□□ 0.95
NIPAL3Q6P499 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.98■□□□□ 0.95
NIPAL3Q6P499 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.98■□□□□ 0.95
NIPAL3Q6P499 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.97■□□□□ 0.95
NIPAL3Q6P499 DUSP8P5-201ENST00000422884 1815 ntBASIC20.97■□□□□ 0.95
NIPAL3Q6P499 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NIPAL3Q6P499 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NIPAL3Q6P499 AC010980.1-201ENST00000587192 1142 ntBASIC20.97■□□□□ 0.95
NIPAL3Q6P499 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NIPAL3Q6P499 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NIPAL3Q6P499 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NIPAL3Q6P499 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NIPAL3Q6P499 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.96■□□□□ 0.95
NIPAL3Q6P499 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.96■□□□□ 0.95
NIPAL3Q6P499 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NIPAL3Q6P499 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.96■□□□□ 0.95
NIPAL3Q6P499 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.96■□□□□ 0.95
NIPAL3Q6P499 AC074183.2-201ENST00000623112 922 ntBASIC20.96■□□□□ 0.95
NIPAL3Q6P499 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NIPAL3Q6P499 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NIPAL3Q6P499 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NIPAL3Q6P499 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NIPAL3Q6P499 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.95■□□□□ 0.94
NIPAL3Q6P499 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NIPAL3Q6P499 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NIPAL3Q6P499 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NIPAL3Q6P499 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NIPAL3Q6P499 HLA-L-211ENST00000482052 1765 ntBASIC20.95■□□□□ 0.94
NIPAL3Q6P499 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NIPAL3Q6P499 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.94■□□□□ 0.94
NIPAL3Q6P499 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NIPAL3Q6P499 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NIPAL3Q6P499 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NIPAL3Q6P499 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
NIPAL3Q6P499 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.94■□□□□ 0.94
NIPAL3Q6P499 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NIPAL3Q6P499 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.94■□□□□ 0.94
NIPAL3Q6P499 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NIPAL3Q6P499 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
NIPAL3Q6P499 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.94■□□□□ 0.94
NIPAL3Q6P499 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NIPAL3Q6P499 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NIPAL3Q6P499 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.94■□□□□ 0.94
NIPAL3Q6P499 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NIPAL3Q6P499 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NIPAL3Q6P499 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NIPAL3Q6P499 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NIPAL3Q6P499 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NIPAL3Q6P499 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NIPAL3Q6P499 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NIPAL3Q6P499 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NIPAL3Q6P499 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NIPAL3Q6P499 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NIPAL3Q6P499 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NIPAL3Q6P499 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NIPAL3Q6P499 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.92■□□□□ 0.94
NIPAL3Q6P499 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
NIPAL3Q6P499 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
NIPAL3Q6P499 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NIPAL3Q6P499 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.92■□□□□ 0.94
NIPAL3Q6P499 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NIPAL3Q6P499 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NIPAL3Q6P499 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NIPAL3Q6P499 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.92■□□□□ 0.94
NIPAL3Q6P499 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NIPAL3Q6P499 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NIPAL3Q6P499 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NIPAL3Q6P499 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NIPAL3Q6P499 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.92■□□□□ 0.94
NIPAL3Q6P499 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NIPAL3Q6P499 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NIPAL3Q6P499 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
NIPAL3Q6P499 AL592295.1-201ENST00000400984 884 ntBASIC20.91■□□□□ 0.94
NIPAL3Q6P499 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.91■□□□□ 0.94
NIPAL3Q6P499 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NIPAL3Q6P499 AC019171.1-201ENST00000601251 1056 ntBASIC20.91■□□□□ 0.94
NIPAL3Q6P499 PVT1_1.1-201ENST00000615125 194 ntBASIC20.91■□□□□ 0.94
NIPAL3Q6P499 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
NIPAL3Q6P499 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NIPAL3Q6P499 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NIPAL3Q6P499 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NIPAL3Q6P499 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NIPAL3Q6P499 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NIPAL3Q6P499 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.9■□□□□ 0.94
NIPAL3Q6P499 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.9■□□□□ 0.94
NIPAL3Q6P499 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NIPAL3Q6P499 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NIPAL3Q6P499 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NIPAL3Q6P499 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms