Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDPF1Q6NVV7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.51■□□□□ 0.39
CDPF1Q6NVV7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDPF1Q6NVV7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDPF1Q6NVV7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDPF1Q6NVV7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.5■□□□□ 0.39
CDPF1Q6NVV7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC17.5■□□□□ 0.39
CDPF1Q6NVV7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDPF1Q6NVV7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.5■□□□□ 0.39
CDPF1Q6NVV7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDPF1Q6NVV7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDPF1Q6NVV7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDPF1Q6NVV7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDPF1Q6NVV7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDPF1Q6NVV7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDPF1Q6NVV7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.49■□□□□ 0.39
CDPF1Q6NVV7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDPF1Q6NVV7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDPF1Q6NVV7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDPF1Q6NVV7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDPF1Q6NVV7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDPF1Q6NVV7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDPF1Q6NVV7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDPF1Q6NVV7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDPF1Q6NVV7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDPF1Q6NVV7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDPF1Q6NVV7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDPF1Q6NVV7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.49■□□□□ 0.39
CDPF1Q6NVV7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC17.48■□□□□ 0.39
CDPF1Q6NVV7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC17.48■□□□□ 0.39
CDPF1Q6NVV7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDPF1Q6NVV7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDPF1Q6NVV7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDPF1Q6NVV7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDPF1Q6NVV7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDPF1Q6NVV7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.48■□□□□ 0.39
CDPF1Q6NVV7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDPF1Q6NVV7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDPF1Q6NVV7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.48■□□□□ 0.39
CDPF1Q6NVV7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.48■□□□□ 0.39
CDPF1Q6NVV7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CDPF1Q6NVV7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDPF1Q6NVV7 AC018358.1-201ENST00000631079 1402 ntBASIC17.47■□□□□ 0.39
CDPF1Q6NVV7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDPF1Q6NVV7 AC004812.2-201ENST00000611079 2094 ntBASIC17.47■□□□□ 0.39
CDPF1Q6NVV7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.47■□□□□ 0.39
CDPF1Q6NVV7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDPF1Q6NVV7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDPF1Q6NVV7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDPF1Q6NVV7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDPF1Q6NVV7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.46■□□□□ 0.39
CDPF1Q6NVV7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CDPF1Q6NVV7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDPF1Q6NVV7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.46■□□□□ 0.39
CDPF1Q6NVV7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDPF1Q6NVV7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDPF1Q6NVV7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.46■□□□□ 0.39
CDPF1Q6NVV7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CDPF1Q6NVV7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDPF1Q6NVV7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDPF1Q6NVV7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.45■□□□□ 0.38
CDPF1Q6NVV7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDPF1Q6NVV7 GUSBP5-202ENST00000510805 1989 ntBASIC17.45■□□□□ 0.38
CDPF1Q6NVV7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CDPF1Q6NVV7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDPF1Q6NVV7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDPF1Q6NVV7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC17.45■□□□□ 0.38
CDPF1Q6NVV7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.44■□□□□ 0.38
CDPF1Q6NVV7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDPF1Q6NVV7 AC021231.2-201ENST00000594613 730 ntBASIC17.44■□□□□ 0.38
CDPF1Q6NVV7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDPF1Q6NVV7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.44■□□□□ 0.38
CDPF1Q6NVV7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.43■□□□□ 0.38
CDPF1Q6NVV7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDPF1Q6NVV7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDPF1Q6NVV7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CDPF1Q6NVV7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDPF1Q6NVV7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDPF1Q6NVV7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDPF1Q6NVV7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDPF1Q6NVV7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.43■□□□□ 0.38
CDPF1Q6NVV7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
CDPF1Q6NVV7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDPF1Q6NVV7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.43■□□□□ 0.38
CDPF1Q6NVV7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDPF1Q6NVV7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDPF1Q6NVV7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.43■□□□□ 0.38
CDPF1Q6NVV7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDPF1Q6NVV7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDPF1Q6NVV7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDPF1Q6NVV7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CDPF1Q6NVV7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.42■□□□□ 0.38
CDPF1Q6NVV7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDPF1Q6NVV7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.42■□□□□ 0.38
CDPF1Q6NVV7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.42■□□□□ 0.38
CDPF1Q6NVV7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDPF1Q6NVV7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDPF1Q6NVV7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDPF1Q6NVV7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.42■□□□□ 0.38
CDPF1Q6NVV7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms