Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC28.25■■■□□ 2.11
TTC39AQ5SRH9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TTC39AQ5SRH9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TTC39AQ5SRH9 AC138932.3-201ENST00000567634 1902 ntBASIC28.24■■■□□ 2.11
TTC39AQ5SRH9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC28.24■■■□□ 2.11
TTC39AQ5SRH9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TTC39AQ5SRH9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TTC39AQ5SRH9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TTC39AQ5SRH9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC28.24■■■□□ 2.11
TTC39AQ5SRH9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC28.24■■■□□ 2.11
TTC39AQ5SRH9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TTC39AQ5SRH9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TTC39AQ5SRH9 HLA-L-211ENST00000482052 1765 ntBASIC28.24■■■□□ 2.11
TTC39AQ5SRH9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC28.24■■■□□ 2.11
TTC39AQ5SRH9 AP003733.4-201ENST00000623785 1697 ntBASIC28.23■■■□□ 2.11
TTC39AQ5SRH9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TTC39AQ5SRH9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC28.23■■■□□ 2.11
TTC39AQ5SRH9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC28.23■■■□□ 2.11
TTC39AQ5SRH9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC28.23■■■□□ 2.11
TTC39AQ5SRH9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC28.23■■■□□ 2.11
TTC39AQ5SRH9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TTC39AQ5SRH9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TTC39AQ5SRH9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TTC39AQ5SRH9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC28.22■■■□□ 2.11
TTC39AQ5SRH9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC28.22■■■□□ 2.11
TTC39AQ5SRH9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TTC39AQ5SRH9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC28.22■■■□□ 2.11
TTC39AQ5SRH9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TTC39AQ5SRH9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC28.22■■■□□ 2.11
TTC39AQ5SRH9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TTC39AQ5SRH9 AC131274.2-201ENST00000580697 1507 ntBASIC28.22■■■□□ 2.11
TTC39AQ5SRH9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC28.21■■■□□ 2.11
TTC39AQ5SRH9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TTC39AQ5SRH9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TTC39AQ5SRH9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
TTC39AQ5SRH9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TTC39AQ5SRH9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TTC39AQ5SRH9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
TTC39AQ5SRH9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC28.2■■■□□ 2.1
TTC39AQ5SRH9 AC004448.1-201ENST00000458332 883 ntBASIC28.2■■■□□ 2.1
TTC39AQ5SRH9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC28.2■■■□□ 2.1
TTC39AQ5SRH9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TTC39AQ5SRH9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC28.19■■■□□ 2.1
TTC39AQ5SRH9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TTC39AQ5SRH9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TTC39AQ5SRH9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC28.18■■■□□ 2.1
TTC39AQ5SRH9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TTC39AQ5SRH9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
TTC39AQ5SRH9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TTC39AQ5SRH9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
TTC39AQ5SRH9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
TTC39AQ5SRH9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC28.17■■■□□ 2.1
TTC39AQ5SRH9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TTC39AQ5SRH9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC28.17■■■□□ 2.1
TTC39AQ5SRH9 MIR6724-1-201ENST00000616420 92 ntBASIC28.17■■■□□ 2.1
TTC39AQ5SRH9 MIR6724-2-201ENST00000616483 92 ntBASIC28.17■■■□□ 2.1
TTC39AQ5SRH9 MIR6724-4-201ENST00000617390 92 ntBASIC28.17■■■□□ 2.1
TTC39AQ5SRH9 MIR6724-3-201ENST00000622482 92 ntBASIC28.17■■■□□ 2.1
TTC39AQ5SRH9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC28.17■■■□□ 2.1
TTC39AQ5SRH9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TTC39AQ5SRH9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
TTC39AQ5SRH9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.17■■■□□ 2.1
TTC39AQ5SRH9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
TTC39AQ5SRH9 CD72-202ENST00000378430 585 ntTSL 3 BASIC28.16■■■□□ 2.1
TTC39AQ5SRH9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC28.16■■■□□ 2.1
TTC39AQ5SRH9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC28.16■■■□□ 2.1
TTC39AQ5SRH9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TTC39AQ5SRH9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC28.15■■■□□ 2.1
TTC39AQ5SRH9 MIR6722-201ENST00000617286 78 ntBASIC28.15■■■□□ 2.1
TTC39AQ5SRH9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC28.15■■■□□ 2.1
TTC39AQ5SRH9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TTC39AQ5SRH9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TTC39AQ5SRH9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
TTC39AQ5SRH9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
TTC39AQ5SRH9 AL022069.1-201ENST00000568025 1636 ntBASIC28.14■■■□□ 2.1
TTC39AQ5SRH9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC28.14■■■□□ 2.1
TTC39AQ5SRH9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
TTC39AQ5SRH9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
TTC39AQ5SRH9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TTC39AQ5SRH9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
TTC39AQ5SRH9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC28.14■■■□□ 2.1
TTC39AQ5SRH9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC28.14■■■□□ 2.1
TTC39AQ5SRH9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
TTC39AQ5SRH9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
TTC39AQ5SRH9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TTC39AQ5SRH9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
TTC39AQ5SRH9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TTC39AQ5SRH9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TTC39AQ5SRH9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC28.13■■■□□ 2.09
TTC39AQ5SRH9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TTC39AQ5SRH9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
TTC39AQ5SRH9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TTC39AQ5SRH9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC28.12■■■□□ 2.09
TTC39AQ5SRH9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TTC39AQ5SRH9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC28.12■■■□□ 2.09
TTC39AQ5SRH9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
TTC39AQ5SRH9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
TTC39AQ5SRH9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC28.11■■■□□ 2.09
TTC39AQ5SRH9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
TTC39AQ5SRH9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms