Protein–RNA interactions for Protein: Q5R3I4

TTC38, Tetratricopeptide repeat protein 38, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38Q5R3I4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
TTC38Q5R3I4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TTC38Q5R3I4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TTC38Q5R3I4 AC103724.3-201ENST00000564481 992 ntBASIC26.36■■□□□ 1.81
TTC38Q5R3I4 MIR4281-201ENST00000580852 62 ntBASIC26.36■■□□□ 1.81
TTC38Q5R3I4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TTC38Q5R3I4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
TTC38Q5R3I4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.35■■□□□ 1.81
TTC38Q5R3I4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TTC38Q5R3I4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.35■■□□□ 1.81
TTC38Q5R3I4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TTC38Q5R3I4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
TTC38Q5R3I4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TTC38Q5R3I4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
TTC38Q5R3I4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
TTC38Q5R3I4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TTC38Q5R3I4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
TTC38Q5R3I4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.34■■□□□ 1.81
TTC38Q5R3I4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.34■■□□□ 1.81
TTC38Q5R3I4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.34■■□□□ 1.81
TTC38Q5R3I4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TTC38Q5R3I4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TTC38Q5R3I4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.33■■□□□ 1.81
TTC38Q5R3I4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.33■■□□□ 1.81
TTC38Q5R3I4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TTC38Q5R3I4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TTC38Q5R3I4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
TTC38Q5R3I4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TTC38Q5R3I4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
TTC38Q5R3I4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TTC38Q5R3I4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.31■■□□□ 1.8
TTC38Q5R3I4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TTC38Q5R3I4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.31■■□□□ 1.8
TTC38Q5R3I4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
TTC38Q5R3I4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
TTC38Q5R3I4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TTC38Q5R3I4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TTC38Q5R3I4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TTC38Q5R3I4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TTC38Q5R3I4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.29■■□□□ 1.8
TTC38Q5R3I4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
TTC38Q5R3I4 AF131216.4-201ENST00000638924 1588 ntBASIC26.29■■□□□ 1.8
TTC38Q5R3I4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TTC38Q5R3I4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TTC38Q5R3I4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TTC38Q5R3I4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TTC38Q5R3I4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TTC38Q5R3I4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TTC38Q5R3I4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TTC38Q5R3I4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.28■■□□□ 1.8
TTC38Q5R3I4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TTC38Q5R3I4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.28■■□□□ 1.8
TTC38Q5R3I4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
TTC38Q5R3I4 ABCB10P4-201ENST00000566803 2184 ntBASIC26.27■■□□□ 1.8
TTC38Q5R3I4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.27■■□□□ 1.8
TTC38Q5R3I4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
TTC38Q5R3I4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.26■■□□□ 1.79
TTC38Q5R3I4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
TTC38Q5R3I4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.26■■□□□ 1.79
TTC38Q5R3I4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
TTC38Q5R3I4 AC131274.2-201ENST00000580697 1507 ntBASIC26.26■■□□□ 1.79
TTC38Q5R3I4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.26■■□□□ 1.79
TTC38Q5R3I4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.26■■□□□ 1.79
TTC38Q5R3I4 AL031848.2-201ENST00000607670 837 ntBASIC26.26■■□□□ 1.79
TTC38Q5R3I4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
TTC38Q5R3I4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TTC38Q5R3I4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TTC38Q5R3I4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.26■■□□□ 1.79
TTC38Q5R3I4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
TTC38Q5R3I4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TTC38Q5R3I4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TTC38Q5R3I4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TTC38Q5R3I4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.25■■□□□ 1.79
TTC38Q5R3I4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.25■■□□□ 1.79
TTC38Q5R3I4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TTC38Q5R3I4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
TTC38Q5R3I4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TTC38Q5R3I4 AL161729.1-201ENST00000604104 1402 ntBASIC26.24■■□□□ 1.79
TTC38Q5R3I4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TTC38Q5R3I4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.24■■□□□ 1.79
TTC38Q5R3I4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
TTC38Q5R3I4 AL022069.1-201ENST00000568025 1636 ntBASIC26.24■■□□□ 1.79
TTC38Q5R3I4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TTC38Q5R3I4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TTC38Q5R3I4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TTC38Q5R3I4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
TTC38Q5R3I4 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.23■■□□□ 1.79
TTC38Q5R3I4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.23■■□□□ 1.79
TTC38Q5R3I4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.23■■□□□ 1.79
TTC38Q5R3I4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TTC38Q5R3I4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.23■■□□□ 1.79
TTC38Q5R3I4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TTC38Q5R3I4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
TTC38Q5R3I4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.23■■□□□ 1.79
TTC38Q5R3I4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TTC38Q5R3I4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.22■■□□□ 1.79
TTC38Q5R3I4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TTC38Q5R3I4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
TTC38Q5R3I4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TTC38Q5R3I4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms