Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.96■□□□□ 0.95
RNFT1Q5M7Z0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.96■□□□□ 0.95
RNFT1Q5M7Z0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNFT1Q5M7Z0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNFT1Q5M7Z0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.96■□□□□ 0.95
RNFT1Q5M7Z0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNFT1Q5M7Z0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
RNFT1Q5M7Z0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RNFT1Q5M7Z0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNFT1Q5M7Z0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNFT1Q5M7Z0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNFT1Q5M7Z0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNFT1Q5M7Z0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.95■□□□□ 0.94
RNFT1Q5M7Z0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
RNFT1Q5M7Z0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.94■□□□□ 0.94
RNFT1Q5M7Z0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNFT1Q5M7Z0 AC131274.2-201ENST00000580697 1507 ntBASIC20.94■□□□□ 0.94
RNFT1Q5M7Z0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RNFT1Q5M7Z0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RNFT1Q5M7Z0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNFT1Q5M7Z0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNFT1Q5M7Z0 MIR935-201ENST00000401179 91 ntBASIC20.93■□□□□ 0.94
RNFT1Q5M7Z0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.93■□□□□ 0.94
RNFT1Q5M7Z0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.93■□□□□ 0.94
RNFT1Q5M7Z0 MIR6089-201ENST00000616698 64 ntBASIC20.93■□□□□ 0.94
RNFT1Q5M7Z0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNFT1Q5M7Z0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.93■□□□□ 0.94
RNFT1Q5M7Z0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNFT1Q5M7Z0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNFT1Q5M7Z0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNFT1Q5M7Z0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.93■□□□□ 0.94
RNFT1Q5M7Z0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNFT1Q5M7Z0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RNFT1Q5M7Z0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RNFT1Q5M7Z0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RNFT1Q5M7Z0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RNFT1Q5M7Z0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RNFT1Q5M7Z0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNFT1Q5M7Z0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNFT1Q5M7Z0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.91■□□□□ 0.94
RNFT1Q5M7Z0 AC005837.3-201ENST00000612163 286 ntBASIC20.91■□□□□ 0.94
RNFT1Q5M7Z0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNFT1Q5M7Z0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RNFT1Q5M7Z0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNFT1Q5M7Z0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNFT1Q5M7Z0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.9■□□□□ 0.94
RNFT1Q5M7Z0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNFT1Q5M7Z0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNFT1Q5M7Z0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.9■□□□□ 0.94
RNFT1Q5M7Z0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNFT1Q5M7Z0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNFT1Q5M7Z0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RNFT1Q5M7Z0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.89■□□□□ 0.94
RNFT1Q5M7Z0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.89■□□□□ 0.94
RNFT1Q5M7Z0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RNFT1Q5M7Z0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNFT1Q5M7Z0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.89■□□□□ 0.93
RNFT1Q5M7Z0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.89■□□□□ 0.93
RNFT1Q5M7Z0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNFT1Q5M7Z0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RNFT1Q5M7Z0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNFT1Q5M7Z0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNFT1Q5M7Z0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNFT1Q5M7Z0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.88■□□□□ 0.93
RNFT1Q5M7Z0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNFT1Q5M7Z0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RNFT1Q5M7Z0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
RNFT1Q5M7Z0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.87■□□□□ 0.93
RNFT1Q5M7Z0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RNFT1Q5M7Z0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNFT1Q5M7Z0 AC005703.6-201ENST00000623265 1329 ntBASIC20.87■□□□□ 0.93
RNFT1Q5M7Z0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.87■□□□□ 0.93
RNFT1Q5M7Z0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RNFT1Q5M7Z0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNFT1Q5M7Z0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNFT1Q5M7Z0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNFT1Q5M7Z0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.86■□□□□ 0.93
RNFT1Q5M7Z0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNFT1Q5M7Z0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNFT1Q5M7Z0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.86■□□□□ 0.93
RNFT1Q5M7Z0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNFT1Q5M7Z0 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.85■□□□□ 0.93
RNFT1Q5M7Z0 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.85■□□□□ 0.93
RNFT1Q5M7Z0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNFT1Q5M7Z0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNFT1Q5M7Z0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNFT1Q5M7Z0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.85■□□□□ 0.93
RNFT1Q5M7Z0 PBX2P1-201ENST00000493219 1291 ntBASIC20.85■□□□□ 0.93
RNFT1Q5M7Z0 AC133561.4-201ENST00000566112 224 ntBASIC20.85■□□□□ 0.93
RNFT1Q5M7Z0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RNFT1Q5M7Z0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNFT1Q5M7Z0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.85■□□□□ 0.93
RNFT1Q5M7Z0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNFT1Q5M7Z0 UNC93B3-201ENST00000308076 687 ntBASIC20.84■□□□□ 0.93
RNFT1Q5M7Z0 SRD5A1P1-201ENST00000442297 786 ntBASIC20.84■□□□□ 0.93
RNFT1Q5M7Z0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNFT1Q5M7Z0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RNFT1Q5M7Z0 AC106739.1-201ENST00000617035 715 ntBASIC20.84■□□□□ 0.93
RNFT1Q5M7Z0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RNFT1Q5M7Z0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms