Protein–RNA interactions for Protein: Q504U0

C4orf46, Renal cancer differentiation gene 1 protein, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46Q504U0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C4orf46Q504U0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.51■□□□□ 0.71
C4orf46Q504U0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C4orf46Q504U0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.51■□□□□ 0.71
C4orf46Q504U0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C4orf46Q504U0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
C4orf46Q504U0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
C4orf46Q504U0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.5■□□□□ 0.71
C4orf46Q504U0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.5■□□□□ 0.71
C4orf46Q504U0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C4orf46Q504U0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
C4orf46Q504U0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.5■□□□□ 0.71
C4orf46Q504U0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
C4orf46Q504U0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C4orf46Q504U0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
C4orf46Q504U0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
C4orf46Q504U0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
C4orf46Q504U0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C4orf46Q504U0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C4orf46Q504U0 MIR6089-201ENST00000616698 64 ntBASIC19.49■□□□□ 0.71
C4orf46Q504U0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
C4orf46Q504U0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C4orf46Q504U0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C4orf46Q504U0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C4orf46Q504U0 AL359258.2-201ENST00000564063 1566 ntBASIC19.49■□□□□ 0.71
C4orf46Q504U0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C4orf46Q504U0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
C4orf46Q504U0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
C4orf46Q504U0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.48■□□□□ 0.71
C4orf46Q504U0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.48■□□□□ 0.71
C4orf46Q504U0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
C4orf46Q504U0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C4orf46Q504U0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
C4orf46Q504U0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
C4orf46Q504U0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C4orf46Q504U0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C4orf46Q504U0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C4orf46Q504U0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.48■□□□□ 0.71
C4orf46Q504U0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C4orf46Q504U0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C4orf46Q504U0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
C4orf46Q504U0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C4orf46Q504U0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.47■□□□□ 0.71
C4orf46Q504U0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C4orf46Q504U0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C4orf46Q504U0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C4orf46Q504U0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C4orf46Q504U0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.47■□□□□ 0.71
C4orf46Q504U0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.47■□□□□ 0.71
C4orf46Q504U0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C4orf46Q504U0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C4orf46Q504U0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C4orf46Q504U0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C4orf46Q504U0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
C4orf46Q504U0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C4orf46Q504U0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
C4orf46Q504U0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
C4orf46Q504U0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C4orf46Q504U0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
C4orf46Q504U0 MIR3665-201ENST00000578708 105 ntBASIC19.45■□□□□ 0.7
C4orf46Q504U0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C4orf46Q504U0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C4orf46Q504U0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.44■□□□□ 0.7
C4orf46Q504U0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C4orf46Q504U0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C4orf46Q504U0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C4orf46Q504U0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C4orf46Q504U0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C4orf46Q504U0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
C4orf46Q504U0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C4orf46Q504U0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.44■□□□□ 0.7
C4orf46Q504U0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C4orf46Q504U0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C4orf46Q504U0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C4orf46Q504U0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C4orf46Q504U0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
C4orf46Q504U0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf46Q504U0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
C4orf46Q504U0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
C4orf46Q504U0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf46Q504U0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
C4orf46Q504U0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.43■□□□□ 0.7
C4orf46Q504U0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf46Q504U0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf46Q504U0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf46Q504U0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf46Q504U0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
C4orf46Q504U0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.43■□□□□ 0.7
C4orf46Q504U0 HLA-L-211ENST00000482052 1765 ntBASIC19.43■□□□□ 0.7
C4orf46Q504U0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf46Q504U0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
C4orf46Q504U0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf46Q504U0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf46Q504U0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf46Q504U0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
C4orf46Q504U0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C4orf46Q504U0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.43■□□□□ 0.7
C4orf46Q504U0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C4orf46Q504U0 MIR219A2-201ENST00000608502 1504 ntBASIC19.42■□□□□ 0.7
C4orf46Q504U0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms