Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
IRX4P78413 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
IRX4P78413 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
IRX4P78413 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
IRX4P78413 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.82■■□□□ 1.4
IRX4P78413 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
IRX4P78413 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
IRX4P78413 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.82■■□□□ 1.4
IRX4P78413 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.82■■□□□ 1.4
IRX4P78413 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.82■■□□□ 1.4
IRX4P78413 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.82■■□□□ 1.4
IRX4P78413 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
IRX4P78413 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
IRX4P78413 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
IRX4P78413 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
IRX4P78413 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
IRX4P78413 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
IRX4P78413 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
IRX4P78413 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.81■■□□□ 1.4
IRX4P78413 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
IRX4P78413 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
IRX4P78413 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
IRX4P78413 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.81■■□□□ 1.4
IRX4P78413 AC131281.2-201ENST00000520478 145 ntBASIC23.81■■□□□ 1.4
IRX4P78413 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
IRX4P78413 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
IRX4P78413 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
IRX4P78413 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
IRX4P78413 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
IRX4P78413 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
IRX4P78413 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
IRX4P78413 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.8■■□□□ 1.4
IRX4P78413 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.8■■□□□ 1.4
IRX4P78413 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
IRX4P78413 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
IRX4P78413 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
IRX4P78413 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
IRX4P78413 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
IRX4P78413 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.79■■□□□ 1.4
IRX4P78413 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.79■■□□□ 1.4
IRX4P78413 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.79■■□□□ 1.4
IRX4P78413 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.79■■□□□ 1.4
IRX4P78413 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.79■■□□□ 1.4
IRX4P78413 AC120024.1-201ENST00000562672 995 ntBASIC23.79■■□□□ 1.4
IRX4P78413 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.79■■□□□ 1.4
IRX4P78413 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
IRX4P78413 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.79■■□□□ 1.4
IRX4P78413 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
IRX4P78413 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
IRX4P78413 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
IRX4P78413 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
IRX4P78413 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.78■■□□□ 1.4
IRX4P78413 AC092028.1-203ENST00000608262 953 ntBASIC23.78■■□□□ 1.4
IRX4P78413 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.78■■□□□ 1.4
IRX4P78413 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
IRX4P78413 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
IRX4P78413 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
IRX4P78413 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
IRX4P78413 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
IRX4P78413 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.77■■□□□ 1.4
IRX4P78413 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.77■■□□□ 1.4
IRX4P78413 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
IRX4P78413 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
IRX4P78413 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
IRX4P78413 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
IRX4P78413 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
IRX4P78413 AL136116.3-201ENST00000402907 1138 ntBASIC23.76■■□□□ 1.39
IRX4P78413 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.76■■□□□ 1.39
IRX4P78413 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
IRX4P78413 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
IRX4P78413 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
IRX4P78413 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
IRX4P78413 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
IRX4P78413 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
IRX4P78413 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
IRX4P78413 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.75■■□□□ 1.39
IRX4P78413 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
IRX4P78413 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
IRX4P78413 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
IRX4P78413 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
IRX4P78413 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
IRX4P78413 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
IRX4P78413 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.74■■□□□ 1.39
IRX4P78413 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
IRX4P78413 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.73■■□□□ 1.39
IRX4P78413 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
IRX4P78413 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
IRX4P78413 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.73■■□□□ 1.39
IRX4P78413 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
IRX4P78413 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
IRX4P78413 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.72■■□□□ 1.39
IRX4P78413 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
IRX4P78413 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
IRX4P78413 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
IRX4P78413 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
IRX4P78413 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
IRX4P78413 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
IRX4P78413 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
IRX4P78413 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
IRX4P78413 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms