Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.74■■□□□ 1.39
CDH4P55283 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.74■■□□□ 1.39
CDH4P55283 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDH4P55283 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CDH4P55283 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDH4P55283 AL356441.2-201ENST00000443009 864 ntBASIC23.73■■□□□ 1.39
CDH4P55283 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.73■■□□□ 1.39
CDH4P55283 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CDH4P55283 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.73■■□□□ 1.39
CDH4P55283 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDH4P55283 AC131274.2-201ENST00000580697 1507 ntBASIC23.73■■□□□ 1.39
CDH4P55283 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.73■■□□□ 1.39
CDH4P55283 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.73■■□□□ 1.39
CDH4P55283 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH4P55283 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH4P55283 AC004448.1-201ENST00000458332 883 ntBASIC23.72■■□□□ 1.39
CDH4P55283 MTDHP2-201ENST00000601468 714 ntBASIC23.72■■□□□ 1.39
CDH4P55283 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.72■■□□□ 1.39
CDH4P55283 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.72■■□□□ 1.39
CDH4P55283 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH4P55283 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.72■■□□□ 1.39
CDH4P55283 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.72■■□□□ 1.39
CDH4P55283 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH4P55283 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.72■■□□□ 1.39
CDH4P55283 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDH4P55283 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDH4P55283 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDH4P55283 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDH4P55283 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDH4P55283 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDH4P55283 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDH4P55283 KRT16P3-201ENST00000439127 1283 ntBASIC23.71■■□□□ 1.39
CDH4P55283 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDH4P55283 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDH4P55283 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.71■■□□□ 1.39
CDH4P55283 AC010997.5-201ENST00000609182 354 ntBASIC23.71■■□□□ 1.39
CDH4P55283 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDH4P55283 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.7■■□□□ 1.39
CDH4P55283 AL022069.1-201ENST00000568025 1636 ntBASIC23.7■■□□□ 1.39
CDH4P55283 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDH4P55283 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDH4P55283 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CDH4P55283 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.7■■□□□ 1.38
CDH4P55283 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDH4P55283 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDH4P55283 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.69■■□□□ 1.38
CDH4P55283 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.69■■□□□ 1.38
CDH4P55283 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.69■■□□□ 1.38
CDH4P55283 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDH4P55283 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDH4P55283 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.69■■□□□ 1.38
CDH4P55283 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDH4P55283 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.69■■□□□ 1.38
CDH4P55283 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CDH4P55283 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CDH4P55283 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDH4P55283 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.68■■□□□ 1.38
CDH4P55283 MIR6722-201ENST00000617286 78 ntBASIC23.68■■□□□ 1.38
CDH4P55283 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.68■■□□□ 1.38
CDH4P55283 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CDH4P55283 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CDH4P55283 AL161729.1-201ENST00000604104 1402 ntBASIC23.67■■□□□ 1.38
CDH4P55283 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CDH4P55283 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.67■■□□□ 1.38
CDH4P55283 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CDH4P55283 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CDH4P55283 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.66■■□□□ 1.38
CDH4P55283 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.66■■□□□ 1.38
CDH4P55283 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.66■■□□□ 1.38
CDH4P55283 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CDH4P55283 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDH4P55283 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDH4P55283 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.65■■□□□ 1.38
CDH4P55283 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDH4P55283 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDH4P55283 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.65■■□□□ 1.38
CDH4P55283 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDH4P55283 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CDH4P55283 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDH4P55283 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.64■■□□□ 1.37
CDH4P55283 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDH4P55283 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDH4P55283 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
CDH4P55283 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDH4P55283 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CDH4P55283 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.63■■□□□ 1.37
CDH4P55283 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDH4P55283 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDH4P55283 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDH4P55283 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
CDH4P55283 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDH4P55283 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.63■■□□□ 1.37
CDH4P55283 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.63■■□□□ 1.37
CDH4P55283 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.63■■□□□ 1.37
CDH4P55283 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDH4P55283 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.62■■□□□ 1.37
CDH4P55283 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.62■■□□□ 1.37
CDH4P55283 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDH4P55283 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CDH4P55283 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms