Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 LYS21YDL131W 1323 nt4.49□□□□□ -1.69
SSU72P53538 TGL4YKR089C 2733 nt4.49□□□□□ -1.69
SSU72P53538 GLO2YDR272W 825 nt4.49□□□□□ -1.69
SSU72P53538 SPO7YAL009W 780 nt4.49□□□□□ -1.69
SSU72P53538 YNL165WYNL165W 1221 nt4.49□□□□□ -1.69
SSU72P53538 NNK1YKL171W 2787 nt4.49□□□□□ -1.69
SSU72P53538 CLF1YLR117C 2064 nt4.49□□□□□ -1.69
SSU72P53538 ATG1YGL180W 2694 nt4.49□□□□□ -1.69
SSU72P53538 TDA7YNL176C 1911 nt4.48□□□□□ -1.69
SSU72P53538 YMR196WYMR196W 3267 nt4.48□□□□□ -1.69
SSU72P53538 YCR047W-AYCR047W-A 207 nt4.48□□□□□ -1.69
SSU72P53538 TRM8YDL201W 861 nt4.48□□□□□ -1.69
SSU72P53538 ARC1YGL105W 1131 nt4.48□□□□□ -1.69
SSU72P53538 NVJ1YHR195W 966 nt4.48□□□□□ -1.69
SSU72P53538 YKR041WYKR041W 753 nt4.48□□□□□ -1.69
SSU72P53538 PIN2YOR104W 849 nt4.48□□□□□ -1.69
SSU72P53538 YPR195CYPR195C 330 nt4.48□□□□□ -1.69
SSU72P53538 FPK1YNR047W 2682 nt4.48□□□□□ -1.69
SSU72P53538 ORC5YNL261W 1440 nt4.47□□□□□ -1.69
SSU72P53538 TRM44YPL030W 1704 nt4.47□□□□□ -1.69
SSU72P53538 SBE2YDR351W 2595 nt4.47□□□□□ -1.69
SSU72P53538 STB2YMR053C 2553 nt4.47□□□□□ -1.69
SSU72P53538 YDR541CYDR541C 1035 nt4.47□□□□□ -1.69
SSU72P53538 YLR125WYLR125W 411 nt4.47□□□□□ -1.69
SSU72P53538 YML101C-AYML101C-A 318 nt4.47□□□□□ -1.69
SSU72P53538 PMT5YDL093W 2232 nt4.47□□□□□ -1.69
SSU72P53538 NPY1YGL067W 1155 nt4.46□□□□□ -1.7
SSU72P53538 YHL049CYHL049C 816 nt4.46□□□□□ -1.7
SSU72P53538 VMA16YHR026W 642 nt4.46□□□□□ -1.7
SSU72P53538 YIR017W-AYIR017W-A 600 nt4.46□□□□□ -1.7
SSU72P53538 PGA3YML125C 939 nt4.46□□□□□ -1.7
SSU72P53538 SSY5YJL156C 2100 nt4.46□□□□□ -1.7
SSU72P53538 SSZ1YHR064C 1617 nt4.46□□□□□ -1.7
SSU72P53538 PDR10YOR328W 4695 nt4.46□□□□□ -1.7
SSU72P53538 YBR139WYBR139W 1527 nt4.46□□□□□ -1.7
SSU72P53538 SMF3YLR034C 1422 nt4.46□□□□□ -1.7
SSU72P53538 PDH1YPR002W 1551 nt4.45□□□□□ -1.7
SSU72P53538 YGR266WYGR266W 2106 nt4.45□□□□□ -1.7
SSU72P53538 YDR154CYDR154C 351 nt4.45□□□□□ -1.7
SSU72P53538 RPL34AYER056C-A 366 nt4.45□□□□□ -1.7
SSU72P53538 KRE9YJL174W 831 nt4.45□□□□□ -1.7
SSU72P53538 CDC21YOR074C 915 nt4.45□□□□□ -1.7
SSU72P53538 MET3YJR010W 1536 nt4.45□□□□□ -1.7
SSU72P53538 GEP3YOR205C 1671 nt4.45□□□□□ -1.7
SSU72P53538 GDE1YPL110C 3672 nt4.44□□□□□ -1.7
SSU72P53538 TFB3YDR460W 966 nt4.44□□□□□ -1.7
SSU72P53538 YML119WYML119W 1074 nt4.44□□□□□ -1.7
SSU72P53538 SNO4YMR322C 714 nt4.44□□□□□ -1.7
SSU72P53538 SOL1YNR034W 966 nt4.44□□□□□ -1.7
SSU72P53538 PDX3YBR035C 687 nt4.44□□□□□ -1.7
SSU72P53538 HSP33YOR391C 714 nt4.44□□□□□ -1.7
SSU72P53538 HSP32YPL280W 714 nt4.44□□□□□ -1.7
SSU72P53538 UBC4YBR082C 447 nt4.44□□□□□ -1.7
SSU72P53538 TDA11YHR159W 1515 nt4.44□□□□□ -1.7
SSU72P53538 NUP116YMR047C 3342 nt4.44□□□□□ -1.7
SSU72P53538 UBP7YIL156W 3216 nt4.43□□□□□ -1.7
SSU72P53538 HOT1YMR172W 2160 nt4.43□□□□□ -1.7
SSU72P53538 YBL044WYBL044W 369 nt4.43□□□□□ -1.7
SSU72P53538 SHP1YBL058W 1272 nt4.43□□□□□ -1.7
SSU72P53538 APM2YHL019C 1818 nt4.43□□□□□ -1.7
SSU72P53538 CNM67YNL225C 1746 nt4.43□□□□□ -1.7
SSU72P53538 GSM1YJL103C 1857 nt4.43□□□□□ -1.7
SSU72P53538 ATG18YFR021W 1503 nt4.42□□□□□ -1.7
SSU72P53538 DNF2YDR093W 4839 nt4.42□□□□□ -1.7
SSU72P53538 CBP4YGR174C 513 nt4.42□□□□□ -1.7
SSU72P53538 ROT1YMR200W 771 nt4.42□□□□□ -1.7
SSU72P53538 YNR048WYNR048W 1182 nt4.42□□□□□ -1.7
SSU72P53538 GPM3YOL056W 912 nt4.42□□□□□ -1.7
SSU72P53538 SLD7YOR060C 774 nt4.42□□□□□ -1.7
SSU72P53538 HRP1YOL123W 1605 nt4.42□□□□□ -1.7
SSU72P53538 BSC5YNR069C 1470 nt4.42□□□□□ -1.7
SSU72P53538 PFK1YGR240C 2964 nt4.41□□□□□ -1.7
SSU72P53538 SHE10YGL228W 1734 nt4.41□□□□□ -1.7
SSU72P53538 STE12YHR084W 2067 nt4.41□□□□□ -1.7
SSU72P53538 YDL144CYDL144C 1071 nt4.41□□□□□ -1.7
SSU72P53538 NQM1YGR043C 1002 nt4.41□□□□□ -1.7
SSU72P53538 PGU1YJR153W 1086 nt4.41□□□□□ -1.7
SSU72P53538 YLL059CYLL059C 507 nt4.41□□□□□ -1.7
SSU72P53538 ACF2YLR144C 2340 nt4.41□□□□□ -1.7
SSU72P53538 HES1YOR237W 1305 nt4.41□□□□□ -1.7
SSU72P53538 ESF1YDR365C 1887 nt4.41□□□□□ -1.7
SSU72P53538 MDM34YGL219C 1380 nt4.4□□□□□ -1.7
SSU72P53538 HUL4YJR036C 2679 nt4.4□□□□□ -1.7
SSU72P53538 TRE1YPL176C 2352 nt4.4□□□□□ -1.7
SSU72P53538 COX26YDR119W-A 201 nt4.4□□□□□ -1.71
SSU72P53538 SCW4YGR279C 1161 nt4.4□□□□□ -1.71
SSU72P53538 RPS19BYNL302C 435 nt4.4□□□□□ -1.71
SSU72P53538 DED81YHR019C 1665 nt4.4□□□□□ -1.71
SSU72P53538 THI20YOL055C 1656 nt4.4□□□□□ -1.71
SSU72P53538 HXT3YDR345C 1704 nt4.4□□□□□ -1.71
SSU72P53538 RPT4YOR259C 1314 nt4.4□□□□□ -1.71
SSU72P53538 HOM3YER052C 1584 nt4.4□□□□□ -1.71
SSU72P53538 HFI1YPL254W 1467 nt4.39□□□□□ -1.71
SSU72P53538 PEX7YDR142C 1128 nt4.39□□□□□ -1.71
SSU72P53538 HSX1tR(CCU)J 72 nt4.39□□□□□ -1.71
SSU72P53538 TFS1YLR178C 660 nt4.39□□□□□ -1.71
SSU72P53538 YMR082CYMR082C 357 nt4.39□□□□□ -1.71
SSU72P53538 UIP4YPL186C 915 nt4.39□□□□□ -1.71
SSU72P53538 VHC1YBR235W 3363 nt4.39□□□□□ -1.71
SSU72P53538 MDM30YLR368W 1797 nt4.39□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 11.3 ms