Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.7■■□□□ 1.22
CLCNKAP51800 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.7■■□□□ 1.22
CLCNKAP51800 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.7■■□□□ 1.22
CLCNKAP51800 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
CLCNKAP51800 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CLCNKAP51800 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
CLCNKAP51800 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLCNKAP51800 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLCNKAP51800 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLCNKAP51800 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CLCNKAP51800 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CLCNKAP51800 AC142381.3-201ENST00000568208 1670 ntBASIC22.69■■□□□ 1.22
CLCNKAP51800 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLCNKAP51800 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CLCNKAP51800 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLCNKAP51800 MTDHP2-201ENST00000601468 714 ntBASIC22.69■■□□□ 1.22
CLCNKAP51800 MIR6722-201ENST00000617286 78 ntBASIC22.69■■□□□ 1.22
CLCNKAP51800 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.69■■□□□ 1.22
CLCNKAP51800 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLCNKAP51800 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CLCNKAP51800 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CLCNKAP51800 AC131212.1-201ENST00000613771 668 ntBASIC22.68■■□□□ 1.22
CLCNKAP51800 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.68■■□□□ 1.22
CLCNKAP51800 AC138932.3-201ENST00000567634 1902 ntBASIC22.68■■□□□ 1.22
CLCNKAP51800 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLCNKAP51800 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CLCNKAP51800 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.67■■□□□ 1.22
CLCNKAP51800 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLCNKAP51800 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.67■■□□□ 1.22
CLCNKAP51800 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.67■■□□□ 1.22
CLCNKAP51800 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.67■■□□□ 1.22
CLCNKAP51800 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLCNKAP51800 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.67■■□□□ 1.22
CLCNKAP51800 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CLCNKAP51800 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCNKAP51800 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.66■■□□□ 1.22
CLCNKAP51800 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.66■■□□□ 1.22
CLCNKAP51800 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CLCNKAP51800 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCNKAP51800 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCNKAP51800 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCNKAP51800 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCNKAP51800 AC004448.1-201ENST00000458332 883 ntBASIC22.66■■□□□ 1.22
CLCNKAP51800 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.66■■□□□ 1.22
CLCNKAP51800 MIR6724-1-201ENST00000616420 92 ntBASIC22.66■■□□□ 1.22
CLCNKAP51800 MIR6724-2-201ENST00000616483 92 ntBASIC22.66■■□□□ 1.22
CLCNKAP51800 MIR6724-4-201ENST00000617390 92 ntBASIC22.66■■□□□ 1.22
CLCNKAP51800 MIR6724-3-201ENST00000622482 92 ntBASIC22.66■■□□□ 1.22
CLCNKAP51800 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.66■■□□□ 1.22
CLCNKAP51800 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
CLCNKAP51800 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLCNKAP51800 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLCNKAP51800 AP003733.4-201ENST00000623785 1697 ntBASIC22.65■■□□□ 1.22
CLCNKAP51800 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.65■■□□□ 1.22
CLCNKAP51800 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLCNKAP51800 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLCNKAP51800 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.65■■□□□ 1.22
CLCNKAP51800 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.65■■□□□ 1.22
CLCNKAP51800 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
CLCNKAP51800 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.65■■□□□ 1.22
CLCNKAP51800 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLCNKAP51800 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLCNKAP51800 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLCNKAP51800 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.65■■□□□ 1.22
CLCNKAP51800 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.64■■□□□ 1.22
CLCNKAP51800 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.64■■□□□ 1.22
CLCNKAP51800 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CLCNKAP51800 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.64■■□□□ 1.21
CLCNKAP51800 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.64■■□□□ 1.21
CLCNKAP51800 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLCNKAP51800 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
CLCNKAP51800 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLCNKAP51800 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLCNKAP51800 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CLCNKAP51800 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLCNKAP51800 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.63■■□□□ 1.21
CLCNKAP51800 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLCNKAP51800 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CLCNKAP51800 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.63■■□□□ 1.21
CLCNKAP51800 HLA-L-211ENST00000482052 1765 ntBASIC22.63■■□□□ 1.21
CLCNKAP51800 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CLCNKAP51800 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLCNKAP51800 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.62■■□□□ 1.21
CLCNKAP51800 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.62■■□□□ 1.21
CLCNKAP51800 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CLCNKAP51800 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLCNKAP51800 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.62■■□□□ 1.21
CLCNKAP51800 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLCNKAP51800 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CLCNKAP51800 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLCNKAP51800 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.61■■□□□ 1.21
CLCNKAP51800 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
CLCNKAP51800 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.61■■□□□ 1.21
CLCNKAP51800 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLCNKAP51800 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLCNKAP51800 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLCNKAP51800 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.6■■□□□ 1.21
CLCNKAP51800 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.6■■□□□ 1.21
CLCNKAP51800 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
CLCNKAP51800 AC131274.2-201ENST00000580697 1507 ntBASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms